RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SLITRK4Q8IW52 837 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 AQP12AQ8IXF9 295 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 FAM47BQ8NA70 645 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 OR5T3Q8NGG3 340 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 OR9A4Q8NGU2 314 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 OR1L3Q8NH93 324 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 PPCDCQ96CD2 204 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 ZNF764Q96H86 408 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-201ENST00000343575 CGREF1Q99674 301 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 HOPXQ9BPY8 73 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-201ENST00000343575 C9orf16Q9BUW7 83 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 BHLHE41Q9C0J9 482 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-201ENST00000343575 IKZF5Q9H5V7 419 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 TAS2R7Q9NYW3 318 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 DAPP1Q9UN19 280 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 PRORSD1PA6NEY8 169 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 FCGR1AP12314 374 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 FRKP42685 505 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-201ENST00000343575 SLC7A2P52569 658 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 PDX1P52945 283 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 CSRP2Q16527 193 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 INAVAQ3KP66 663 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 C6orf10Q5SRN2 563 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 DNAJC14Q6Y2X3 702 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-201ENST00000343575 R3HCC1LQ7Z5L2 792 aaKnown RBP13.86□□□□□ -0.19
CXCL12-201ENST00000343575 RNF148Q8N7C7 305 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 TMEM125Q96AQ2 219 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 ZNF501Q96CX3 271 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-201ENST00000343575 CCDC74BQ96LY2 380 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 CCDC115Q96NT0 180 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 CSF3RQ99062 836 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 PRRX2Q99811 253 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 CCM2LQ9NUG4 571 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-201ENST00000343575 GID8Q9NWU2 228 aa13.86□□□□□ -0.19
CXCL12-201ENST00000343575 TMEM184BQ9Y519 407 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-201ENST00000343575 A0A096LPI6 279 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 A0A1W2PS29 197 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 HYKKA2RU49 373 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 TMEM150CB9EJG8 249 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 D6RAR5 112 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 SGK494L7N484 410 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 RNASET2O00584 256 aaKnown RBP13.85□□□□□ -0.19
CXCL12-201ENST00000343575 GDF9O60383 454 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 KCNH1O95259 989 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 GSNP06396 782 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 DRD2P14416 443 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 MSX2P35548 267 aaPredicted RBP13.85□□□□□ -0.19
CXCL12-201ENST00000343575 ALDH9A1P49189 494 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 PCBP4P57723 403 aaKnown RBP13.85□□□□□ -0.19
CXCL12-201ENST00000343575 FOXM1Q08050 763 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 MTX3Q5HYI7 312 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 NCCRP1Q6ZVX7 275 aaPredicted RBP13.85□□□□□ -0.19
CXCL12-201ENST00000343575 B3GNT8Q7Z7M8 397 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 SLCO4A1Q96BD0 722 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 PPWD1Q96BP3 646 aaKnown RBP13.85□□□□□ -0.19
CXCL12-201ENST00000343575 AURKBQ96GD4 344 aaPredicted RBP13.85□□□□□ -0.19
CXCL12-201ENST00000343575 ITCHQ96J02 903 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 ROGDIQ9GZN7 287 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 MUC13Q9H3R2 512 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 CXorf21Q9HAI6 301 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 TMEM9BQ9NQ34 198 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 MIEF1Q9NQG6 463 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 LYARQ9NX58 379 aaKnown RBP13.85□□□□□ -0.19
CXCL12-201ENST00000343575 BTNL2Q9UIR0 455 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 SCN2AQ99250 2005 aa13.85□□□□□ -0.19
CXCL12-201ENST00000343575 A0A0A6YYC8 382 aaPredicted RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 I3L1I5 382 aaPredicted RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 MAGEB3O15480 346 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 B3GALT2O43825 422 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 RDH16O75452 317 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 GP1BAP07359 652 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 IL10P22301 178 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 RPL3P39023 403 aaKnown RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 STT3AP46977 705 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 HNRNPFP52597 415 aaKnown RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 HBA1P69905 142 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 DUSP2Q05923 314 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 ZFP36L1Q07352 338 aaKnown RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 BNIP2Q12982 314 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 FAM53BQ14153 422 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 RUNDC3AQ59EK9 446 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 TCTE1Q5JU00 501 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 NIPAL1Q6NVV3 410 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 ISLR2Q6UXK2 745 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 NAXDQ8IW45 347 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 CA13Q8N1Q1 262 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 C10orf111Q8N326 155 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 FAM156AQ8NDB6 213 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 TMEM52Q8NDY8 209 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 CHPT1Q8WUD6 406 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 GFM1Q96RP9 751 aaKnown RBP13.84□□□□□ -0.19
CXCL12-201ENST00000343575 SLC29A1Q99808 456 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 CIB1Q99828 191 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 NLNQ9BYT8 704 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 SEMA6AQ9H2E6 1030 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 SYNDIG1Q9H7V2 258 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 RMND5AQ9H871 391 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 FGF21Q9NSA1 209 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 EHD3Q9NZN3 535 aa13.84□□□□□ -0.19
CXCL12-201ENST00000343575 FTSJ1Q9UET6 329 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms