RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TRIQKQ629K1 86 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 PLET1Q6UQ28 207 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 ZNF438Q7Z4V0 828 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 HORMAD2Q8N7B1 307 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 C19orf18Q8NEA5 215 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 GPR32P1Q8NGA4 272 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 OR2A12Q8NGT7 310 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 ZNF689Q96CS4 500 aaPredicted RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 TRMT61AQ96FX7 289 aaKnown RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 ZC3HAV1LQ96H79 300 aaKnown RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 ZFYVE19Q96K21 471 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 COQ7Q99807 217 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 TRAF4Q9BUZ4 470 aaPredicted RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 C11orf54Q9H0W9 315 aaPredicted RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 MMP28Q9H239 520 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 MIXL1Q9H2W2 232 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 RPRD1BQ9NQG5 326 aaKnown RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 SEC14L3Q9UDX4 400 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 PLEKHB1Q9UF11 243 aaPredicted RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 PHF11Q9UIL8 331 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 EXOSC1Q9Y3B2 195 aaKnown RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 SPIN1Q9Y657 262 aaPredicted RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 NUP210Q8TEM1 1887 aaPredicted RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 LINC00854A0A1B0GVQ3 168 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 A0A1W2PRQ8 180 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 CARNS1A5YM72 827 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 A8MV72 311 aaPredicted RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 HEPACAM2A8MVW5 462 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 FAM227AF5H4B4 570 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 TPD52L2O43399 206 aaKnown RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 NDUFB5O43674 189 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 TLX2O43763 284 aaPredicted RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 PBLDP30039 288 aaPredicted RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 SMSP52788 366 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 RAB40BQ12829 278 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 TPBGQ13641 420 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 ATAT1Q5SQI0 421 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 C22orf42Q6IC83 251 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 TECPR1Q7Z6L1 1165 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 HCAR2Q8TDS4 363 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 UFD1Q92890 307 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 FOXJ1Q92949 421 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 SLC6A18Q96N87 628 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 SPATA5L1Q9BVQ7 753 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 PRRG3Q9BZD7 231 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 RRAGCQ9HB90 399 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 RANGRFQ9HD47 186 aaPredicted RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 FGF20Q9NP95 211 aaPredicted RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 MRPS18AQ9NVS2 196 aaKnown RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 TESQ9UGI8 421 aaKnown RBP13.14□□□□□ -0.31
MKS1-201ENST00000313863 CEP350Q5VT06 3117 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 KIAA1549LQ6ZVL6 1849 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 MYOFQ9NZM1 2061 aa13.14□□□□□ -0.31
MKS1-201ENST00000313863 A6NL46 340 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 NOTOA8MTQ0 251 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 KLHL18O94889 574 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 PRKAR1AP10644 381 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 TIMP2P16035 220 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 TNNI3P19429 210 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 PDHA2P29803 388 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 PPP2R1BP30154 601 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 NNMTP40261 264 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 IL12RB1P42701 662 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 SYT14P1Q58G82 188 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 RPS26P11Q5JNZ5 115 aaPredicted RBP13.13□□□□□ -0.31
MKS1-201ENST00000313863 PPP2R2DQ66LE6 453 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 TNFAIP8L2Q6P589 184 aaPredicted RBP13.13□□□□□ -0.31
MKS1-201ENST00000313863 TMIGD1Q6UXZ0 262 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 SLC9B2Q86UD5 537 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 PLCZ1Q86YW0 608 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 LILRA3Q8N6C8 439 aaPredicted RBP13.13□□□□□ -0.31
MKS1-201ENST00000313863 UBASH3BQ8TF42 649 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 AP2M1Q96CW1 435 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 ZNF764Q96H86 408 aaPredicted RBP13.13□□□□□ -0.31
MKS1-201ENST00000313863 ZNF558Q96NG5 402 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 FUZQ9BT04 418 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 FNDC11Q9BVV2 318 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 TMEM121BQ9BXQ6 578 aaPredicted RBP13.13□□□□□ -0.31
MKS1-201ENST00000313863 NIPAL2Q9H841 368 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 DIABLOQ9NR28 239 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 ZSCAN32Q9NX65 697 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 DKK3Q9UBP4 350 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 NUFIP1Q9UHK0 495 aaKnown RBP13.13□□□□□ -0.31
MKS1-201ENST00000313863 ADAM30Q9UKF2 790 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 SLC9A8Q9Y2E8 581 aa13.13□□□□□ -0.31
MKS1-201ENST00000313863 WWP2O00308 870 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 PLD2O14939 933 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 ALDH1A1P00352 501 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 MYCP01106 439 aaPredicted RBP13.12□□□□□ -0.31
MKS1-201ENST00000313863 HLA-DQB1P01920 261 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 MSL3P1P0C860 447 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 ACP2P11117 423 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 CFL1P23528 166 aaKnown RBP13.12□□□□□ -0.31
MKS1-201ENST00000313863 FGF9P31371 208 aaPredicted RBP13.12□□□□□ -0.31
MKS1-201ENST00000313863 GABRA5P31644 462 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 MAP2K3P46734 347 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 DGKEP52429 567 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 MAPK12P53778 367 aa13.12□□□□□ -0.31
MKS1-201ENST00000313863 RAB25P57735 213 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms