RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 ARMC3Q5W041 872 aa13.62□□□□□ -0.23
USB1-214ENST00000568848 CAPN12Q6ZSI9 719 aa13.62□□□□□ -0.23
USB1-214ENST00000568848 FRA10AC1Q70Z53 315 aa13.62□□□□□ -0.23
USB1-214ENST00000568848 PRR22Q8IZ63 422 aa13.62□□□□□ -0.23
USB1-214ENST00000568848 FBXW8Q8N3Y1 598 aa13.62□□□□□ -0.23
USB1-214ENST00000568848 ACOT4Q8N9L9 421 aa13.62□□□□□ -0.23
USB1-214ENST00000568848 C9orf106Q8NAJ2 232 aa13.62□□□□□ -0.23
USB1-214ENST00000568848 TIMP4Q99727 224 aa13.62□□□□□ -0.23
USB1-214ENST00000568848 ERVK-6Q9BXR3 956 aa13.62□□□□□ -0.23
USB1-214ENST00000568848 WWOXQ9NZC7 414 aa13.62□□□□□ -0.23
USB1-214ENST00000568848 CTNNAL1Q9UBT7 734 aa13.62□□□□□ -0.23
USB1-214ENST00000568848 COPS7AQ9UBW8 275 aa13.62□□□□□ -0.23
USB1-214ENST00000568848 ERVK-19Q9WJR5 959 aa13.62□□□□□ -0.23
USB1-214ENST00000568848 ATRQ13535 2644 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 STAB1Q9NY15 2570 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 TRIM64A6NGJ6 449 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 TRIM64BA6NI03 449 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 GLOD5A6NK44 160 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 DNALI1O14645 258 aaPredicted RBP13.61□□□□□ -0.23
USB1-214ENST00000568848 PHGDHO43175 533 aaKnown RBP13.61□□□□□ -0.23
USB1-214ENST00000568848 TGFB1P01137 390 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 CLPSP04118 112 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 HRGP04196 525 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 EPXP11678 715 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 PCNAP12004 261 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 CPN2P22792 545 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 MSH2P43246 934 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 DAZAP2Q15038 168 aaPredicted RBP13.61□□□□□ -0.23
USB1-214ENST00000568848 OR4D1Q15615 310 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 CYP1B1Q16678 543 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 WIPI1Q5MNZ9 446 aaPredicted RBP13.61□□□□□ -0.23
USB1-214ENST00000568848 LUZP2Q86TE4 346 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 CXorf67Q86X51 503 aaPredicted RBP13.61□□□□□ -0.23
USB1-214ENST00000568848 GPSM1Q86YR5 675 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 OR5L2Q8NGL0 311 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 NUDT8Q8WV74 236 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 SLC44A1Q8WWI5 657 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 PDLIM5Q96HC4 596 aaKnown RBP13.61□□□□□ -0.23
USB1-214ENST00000568848 GNRHR2Q96P88 292 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 DGAT2Q96PD7 388 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 OSBPL9Q96SU4 736 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 YIPF4Q9BSR8 244 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 DOHHQ9BU89 302 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 OR51B5Q9H339 312 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 SMYD2Q9NRG4 433 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 ASIC3Q9UHC3 531 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 BOKQ9UMX3 212 aaPredicted RBP13.61□□□□□ -0.23
USB1-214ENST00000568848 WIF1Q9Y5W5 379 aa13.61□□□□□ -0.23
USB1-214ENST00000568848 SONP18583 2426 aaKnown RBP13.6□□□□□ -0.23
USB1-214ENST00000568848 C2orf72A6NCS6 295 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 ZSCAN12O43309 604 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 EPPINO95925 133 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 HEXAP06865 529 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 SSTR4P31391 388 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 STT3AP46977 705 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 HNRNPH2P55795 449 aaKnown RBP13.6□□□□□ -0.23
USB1-214ENST00000568848 DDX39BQ13838 428 aaKnown RBP13.6□□□□□ -0.23
USB1-214ENST00000568848 ZNF267Q14586 743 aaPredicted RBP13.6□□□□□ -0.23
USB1-214ENST00000568848 PPP1R7Q15435 360 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 MPEG1Q2M385 716 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 FBXL19-AS1Q494R0 122 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 Q5PR19 223 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 FNDC7Q5VTL7 733 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 FAM219BQ5XKK7 198 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 CAMKMTQ7Z624 323 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 ZC3HC1Q86WB0 502 aaKnown RBP13.6□□□□□ -0.23
USB1-214ENST00000568848 KRT78Q8N1N4 520 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 OR8K3Q8NH51 312 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 SLC22A8Q8TCC7 542 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 PIGQQ9BRB3 760 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 MS4A8Q9BY19 250 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 WWTR1Q9GZV5 400 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 DDX47Q9H0S4 455 aaKnown RBP13.6□□□□□ -0.23
USB1-214ENST00000568848 DNAJC11Q9NVH1 559 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 C6orf203Q9P0P8 240 aaPredicted RBP13.6□□□□□ -0.23
USB1-214ENST00000568848 EXPH5Q8NEV8 1989 aa13.6□□□□□ -0.23
USB1-214ENST00000568848 PGRMC1O00264 195 aaKnown RBP13.59□□□□□ -0.23
USB1-214ENST00000568848 GNB5O14775 395 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 SIAH2O43255 324 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 TRIM3O75382 744 aaPredicted RBP13.59□□□□□ -0.23
USB1-214ENST00000568848 FBXO45P0C2W1 286 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 BMP7P18075 431 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 SSR2P43308 183 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 CHIT1Q13231 466 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 EFTUD2Q15029 972 aaKnown RBP eCLIP13.59□□□□□ -0.23
USB1-214ENST00000568848 TOMM20Q15388 145 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 TGFBIQ15582 683 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 YRDCQ86U90 279 aaKnown RBP13.59□□□□□ -0.23
USB1-214ENST00000568848 TTLQ8NG68 377 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 NUBPLQ8TB37 319 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 ZNF473Q8WTR7 871 aaKnown RBP13.59□□□□□ -0.23
USB1-214ENST00000568848 DIO2Q92813 273 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 RILPQ96NA2 401 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 UGT2B28Q9BY64 529 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 NT5DC2Q9H857 520 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 LYRM4Q9HD34 91 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 NEUROD4Q9HD90 331 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 ACKR4Q9NPB9 350 aa13.59□□□□□ -0.23
USB1-214ENST00000568848 MTRF1LQ9UGC7 380 aaKnown RBP13.59□□□□□ -0.23
USB1-214ENST00000568848 ADAM21Q9UKJ8 722 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms