RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 LRIT2A6NDA9 550 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 ESPNB1AK53 854 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 PGRMC1O00264 195 aaKnown RBP10.57□□□□□ -0.72
RNF4-216ENST00000511859 PHF1O43189 567 aaPredicted RBP10.57□□□□□ -0.72
RNF4-216ENST00000511859 SIAH2O43255 324 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 ERI3O43414 337 aaKnown RBP10.57□□□□□ -0.72
RNF4-216ENST00000511859 TRIM3O75382 744 aaPredicted RBP10.57□□□□□ -0.72
RNF4-216ENST00000511859 URI1O94763 535 aaPredicted RBP10.57□□□□□ -0.72
RNF4-216ENST00000511859 SNX4O95219 450 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 ACSL3O95573 720 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 CYP4B1P13584 511 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 TCP1P17987 556 aaKnown RBP10.57□□□□□ -0.72
RNF4-216ENST00000511859 CRYGSP22914 178 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 CDK9P50750 372 aaKnown RBP10.57□□□□□ -0.72
RNF4-216ENST00000511859 TNK1Q13470 666 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 CAPRIN1Q14444 709 aaKnown RBP10.57□□□□□ -0.72
RNF4-216ENST00000511859 CHRFAM7AQ494W8 412 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 CASC4Q6P4E1 433 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 SCIMPQ6UWF3 145 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 NXPE4Q6UWF7 544 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 LYPD8Q6UX82 237 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 SPNS2Q8IVW8 549 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 DENND6AQ8IWF6 608 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 KLHDC8AQ8IYD2 350 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 FAM13CQ8NE31 585 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 TTLQ8NG68 377 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 TMEM171Q8WVE6 324 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 ABTB1Q969K4 478 aaPredicted RBP10.57□□□□□ -0.72
RNF4-216ENST00000511859 MS4A6EQ96DS6 147 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 ZNF597Q96LX8 424 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 RUNDC3BQ96NL0 473 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 WFIKKN1Q96NZ8 548 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 UCN2Q96RP3 112 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 UGT2B28Q9BY64 529 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 UBQLN3Q9H347 655 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 CXorf56Q9H5V9 222 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 TRMT6Q9UJA5 497 aaKnown RBP10.57□□□□□ -0.72
RNF4-216ENST00000511859 CNOT11Q9UKZ1 510 aaKnown RBP10.57□□□□□ -0.72
RNF4-216ENST00000511859 DAPP1Q9UN19 280 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 SLC6A5Q9Y345 797 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 DYRK1BQ9Y463 629 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 KCNE2Q9Y6J6 123 aa10.57□□□□□ -0.72
RNF4-216ENST00000511859 ETHE1O95571 254 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 ACTL6AO96019 429 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 FBXO45P0C2W1 286 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 ZSCAN5DPP0CG00 497 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 COX7A2P14406 83 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 CPN1P15169 458 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 GSTM2P28161 218 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 LIM2P55344 173 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 BASP1P80723 227 aaKnown RBP10.56□□□□□ -0.72
RNF4-216ENST00000511859 BIKQ13323 160 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 DHX34Q14147 1143 aaKnown RBP10.56□□□□□ -0.72
RNF4-216ENST00000511859 OR10G3Q8NGC4 313 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 CALML6Q8TD86 181 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 IGFBPL1Q8WX77 278 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 WNT2BQ93097 391 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 UCN3Q969E3 161 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 FBXL8Q96CD0 374 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 SENP5Q96HI0 755 aaPredicted RBP10.56□□□□□ -0.72
RNF4-216ENST00000511859 QRFPRQ96P65 431 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 SERINC2Q96SA4 455 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 HOMER3Q9NSC5 361 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.56□□□□□ -0.72
RNF4-216ENST00000511859 TAS2R13Q9NYV9 303 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 FETUBQ9UGM5 382 aa10.56□□□□□ -0.72
RNF4-216ENST00000511859 A0A0G2JN53 185 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 MYOCOSA0A1B0GUC4 107 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 KIF2AO00139 706 aaPredicted RBP10.55□□□□□ -0.72
RNF4-216ENST00000511859 TP53I11O14683 189 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 MSTNO14793 375 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 DYRK3O43781 588 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 CD5LO43866 347 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 H2AFYO75367 372 aaKnown RBP10.55□□□□□ -0.72
RNF4-216ENST00000511859 HAUS5O94927 633 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 NID1P14543 1247 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 TPSB2P20231 275 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 CHMP24386 653 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 MSH2P43246 934 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 SLCO1A2P46721 670 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 KCNJ1P48048 391 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 MTTPP55157 894 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 ATP5J2P56134 94 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 SARNPP82979 210 aaKnown RBP10.55□□□□□ -0.72
RNF4-216ENST00000511859 FAM27E3Q08E93 113 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 TPSAB1Q15661 275 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 ETFDHQ16134 617 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 NTRK2Q16620 822 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 WIPI1Q5MNZ9 446 aaPredicted RBP10.55□□□□□ -0.72
RNF4-216ENST00000511859 TRIM40Q6P9F5 258 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 TMPRSS11BQ86T26 416 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 PACS2Q86VP3 889 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 CREG2Q8IUH2 290 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 C9orf40Q8IXQ3 194 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 OR2L5Q8NG80 312 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 ACTRT1Q8TDG2 376 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 MAIP1Q8WWC4 291 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 SLC44A1Q8WWI5 657 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 DIO2Q92813 273 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 INTS12Q96CB8 462 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms