RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ABOP16442 354 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 COL8A1P27658 744 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 ERVK-8P63133 956 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 HSF1Q00613 529 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 BIKQ13323 160 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 C3AR1Q16581 482 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 KRTCAP3Q53RY4 240 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 SGO1Q5FBB7 561 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 ZNF678Q5SXM1 525 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 FAM219BQ5XKK7 198 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 MTFR2Q6P444 385 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 IL20RBQ6UXL0 311 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 DGAT2L6Q6ZPD8 337 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 PAGE2Q7Z2X7 111 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 C9orf40Q8IXQ3 194 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 CNPY4Q8N129 248 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 GHDCQ8N2G8 530 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 MYRIPQ8NFW9 859 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 OR5L2Q8NGL0 311 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 NUBPLQ8TB37 319 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 ACMSDQ8TDX5 336 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 TRPC4APQ8TEL6 797 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 MZB1Q8WU39 189 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 UBLCP1Q8WVY7 318 aaPredicted RBP9.43□□□□□ -0.9
SF3A3-204ENST00000462258 SELENOMQ8WWX9 145 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 PPWD1Q96BP3 646 aaKnown RBP9.43□□□□□ -0.9
SF3A3-204ENST00000462258 RBM18Q96H35 190 aaKnown RBP9.43□□□□□ -0.9
SF3A3-204ENST00000462258 FARSBQ9NSD9 589 aaKnown RBP9.43□□□□□ -0.9
SF3A3-204ENST00000462258 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.43□□□□□ -0.9
SF3A3-204ENST00000462258 TBK1Q9UHD2 729 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 TINAGQ9UJW2 476 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 ADAM29Q9UKF5 820 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 SNX6Q9UNH7 406 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 SLC12A4Q9UP95 1085 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 ERVK-19Q9WJR5 959 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 MYO7BQ6PIF6 2116 aa9.43□□□□□ -0.9
SF3A3-204ENST00000462258 A0A0G2JMM0 328 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 A0A1W2PPB8 328 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 A0A1W2PRS3 328 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 KIR3DP1A8MWS1 328 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 ACOT7O00154 380 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 ASNA1O43681 348 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 HS6ST1O60243 411 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 DLX3O60479 287 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 GLRA3O75311 464 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 SUPT7LO94864 414 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 OR4F21O95013 312 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 GPR75O95800 540 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 PDYNP01213 254 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 GSTA1P08263 222 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 PYGBP11216 843 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 ATP5F1P24539 256 aaPredicted RBP9.42□□□□□ -0.9
SF3A3-204ENST00000462258 TNFRSF8P28908 595 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 PTGER1P34995 402 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 DCTP40126 519 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 CLCQ05315 142 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 ASPHQ12797 758 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 EBPQ15125 230 aaKnown RBP9.42□□□□□ -0.9
SF3A3-204ENST00000462258 RASA2Q15283 850 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 TCHHL1Q5QJ38 904 aaPredicted RBP9.42□□□□□ -0.9
SF3A3-204ENST00000462258 NDUFAF5Q5TEU4 345 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 ZNF787Q6DD87 383 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 RPTNQ6XPR3 784 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 RNF111Q6ZNA4 994 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 Q6ZPB1 254 aaPredicted RBP9.42□□□□□ -0.9
SF3A3-204ENST00000462258 RTL4Q6ZR62 310 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 COMMD6Q7Z4G1 85 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 SLC22A9Q8IVM8 553 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 METTL4Q8N3J2 472 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 CDYL2Q8N8U2 506 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 EIF1ADQ8N9N8 165 aaKnown RBP9.42□□□□□ -0.9
SF3A3-204ENST00000462258 ZFP62Q8NB50 900 aaPredicted RBP9.42□□□□□ -0.9
SF3A3-204ENST00000462258 SLC22A8Q8TCC7 542 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 DOK4Q8TEW6 326 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 SENP5Q96HI0 755 aaPredicted RBP9.42□□□□□ -0.9
SF3A3-204ENST00000462258 GAL3ST4Q96RP7 486 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 ZNF382Q96SR6 550 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 HBEGFQ99075 208 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 L2HGDHQ9H9P8 463 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 BRF2Q9HAW0 419 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 DEPPQ9NTK1 212 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 AHSPQ9NZD4 102 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 ZNF225Q9UK10 706 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 STK38LQ9Y2H1 464 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 ZNF835Q9Y2P0 537 aa9.42□□□□□ -0.9
SF3A3-204ENST00000462258 GTF3C1Q12789 2109 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 CENPEQ02224 2701 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 CRYBG3Q68DQ2 2970 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 A0A1W2PS29 197 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 PINLYPA6NC86 204 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 WASHC1A8K0Z3 465 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 G3V3Y1 287 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 ZNHIT1O43257 154 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 CDC40O60508 579 aaKnown RBP eCLIP9.41□□□□□ -0.9
SF3A3-204ENST00000462258 ZNF354AO60765 605 aaPredicted RBP9.41□□□□□ -0.9
SF3A3-204ENST00000462258 NADKO95544 446 aaPredicted RBP9.41□□□□□ -0.9
SF3A3-204ENST00000462258 KRT6AP02538 564 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 KRT6BP04259 564 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 SHBGP04278 402 aa9.41□□□□□ -0.9
SF3A3-204ENST00000462258 KLK1P06870 262 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms