RNA–Protein interactions for RNA: ENST00000595797.5

PAF1-205, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 3

Gene PAF1, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-205	ENST00000595797	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.77	□□□□□ -0.53
PAF1-205	ENST00000595797	CAMK2A	Q9UQM7	478 aa		11.77	□□□□□ -0.53
PAF1-205	ENST00000595797	SLC22A14	Q9Y267	594 aa		11.77	□□□□□ -0.53
PAF1-205	ENST00000595797	HIVEP2	P31629	2446 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	ZCWPW2	A0A1B0GU75	182 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	MYOCOS	A0A1B0GUC4	107 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	FAM187A	A6NFU0	413 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	SMAD7	O15105	426 aa	Known RBP	11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	SMPD2	O60906	423 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	CTNS	O60931	367 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	ERN1	O75460	977 aa	Known RBP	11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	TRAPPC6A	O75865	159 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	KRT14	P02533	472 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	SMIM10L1	P0DMW3	83 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	H2AFX	P16104	143 aa	Predicted RBP	11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	GNAZ	P19086	355 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	GCK	P35557	465 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	MSH2	P43246	934 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	SORD	Q00796	357 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	ASPH	Q12797	758 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	RUNX2	Q13950	521 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	RCAN2	Q14206	197 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	ACSF3	Q4G176	576 aa	Predicted RBP	11.76	□□□□□ -0.53
PAF1-205	ENST00000595797		Q5PR19	223 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	TMIGD1	Q6UXZ0	262 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	KLHL7	Q8IXQ5	586 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	DND1	Q8IYX4	353 aa	Known RBP	11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	VWA5B2	Q8N398	1253 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	TNIP2	Q8NFZ5	429 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	LINC01560	Q8TB33	94 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	SLC2A12	Q8TD20	617 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	MAGOHB	Q96A72	148 aa	Known RBP	11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	SMIM10	Q96HG1	83 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	ART5	Q96L15	291 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	ZNF597	Q96LX8	424 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	SERPINB12	Q96P63	405 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	DOHH	Q9BU89	302 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	BDH2	Q9BUT1	245 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	PARD6B	Q9BYG5	372 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	REXO4	Q9GZR2	422 aa	Known RBP	11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	DDX47	Q9H0S4	455 aa	Known RBP	11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	PPAN	Q9NQ55	473 aa	Known RBP	11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	QPCTL	Q9NXS2	382 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	CNIH4	Q9P003	139 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	VTI1B	Q9UEU0	232 aa		11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.76	□□□□□ -0.53
PAF1-205	ENST00000595797	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	CCDC151	A5D8V7	595 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	CLGN	O14967	610 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	RAD51C	O43502	376 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	WDR47	O94967	919 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	LY6G6D	O95868	133 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	EPPIN	O95925	133 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	ENDOU	P21128	410 aa	Known RBP	11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	CERS1	P27544	350 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	OPRM1	P35372	400 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	TIMP3	P35625	211 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	MASP1	P48740	699 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	HNRNPF	P52597	415 aa	Known RBP	11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	FOXO1	Q12778	655 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	SLBP	Q14493	270 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	MPEG1	Q2M385	716 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	RBM20	Q5T481	1227 aa	Known RBP	11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	ANKRD22	Q5VYY1	191 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	CAND1	Q86VP6	1230 aa	Known RBP	11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	EIF1AD	Q8N9N8	165 aa	Known RBP	11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	SIMC1	Q8NDZ2	872 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	OR2L5	Q8NG80	312 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	GRK7	Q8WTQ7	553 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	MS4A6E	Q96DS6	147 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	SPACA9	Q96E40	222 aa	Predicted RBP	11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	ARSG	Q96EG1	525 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	DGAT2	Q96PD7	388 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	GAL3ST4	Q96RP7	486 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	TRIB1	Q96RU8	372 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	ROGDI	Q9GZN7	287 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	ACKR4	Q9NPB9	350 aa		11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	FN1	P02751	2386 aa	Known RBP	11.75	□□□□□ -0.53
PAF1-205	ENST00000595797	CAPN14	A8MX76	684 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	C4orf51	C9J302	202 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	TGFBR3L	H3BV60	316 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797		H7C1Q1	480 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	LDB3	O75112	727 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	C1GALT1C1L	P0DN25	315 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	PGAM1	P18669	254 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	SERPINB3	P29508	390 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	MAGEA6	P43360	314 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	CDKN2D	P55273	166 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	LIM2	P55344	173 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	WNT3	P56703	355 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	DR1	Q01658	176 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	DUSP8	Q13202	625 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	TBCEL	Q5QJ74	424 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	FAM45BP	Q6NSW5	357 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	CCDC137	Q6PK04	289 aa	Known RBP	11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	SLC29A4	Q7RTT9	530 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	IFT20	Q8IY31	132 aa		11.74	□□□□□ -0.53
PAF1-205	ENST00000595797	NAXE	Q8NCW5	288 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms