RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 SHISA5Q8N114 240 aa6.68□□□□□ -1.34
USP1-202ENST00000371146 TMEM132CQ8N3T6 1108 aa6.68□□□□□ -1.34
USP1-202ENST00000371146 OR4K1Q8NGD4 311 aa6.68□□□□□ -1.34
USP1-202ENST00000371146 OR6C4Q8NGE1 309 aa6.68□□□□□ -1.34
USP1-202ENST00000371146 RTP4Q96DX8 246 aa6.68□□□□□ -1.34
USP1-202ENST00000371146 CCNL2Q96S94 520 aaPredicted RBP6.68□□□□□ -1.34
USP1-202ENST00000371146 ORAI3Q9BRQ5 295 aa6.68□□□□□ -1.34
USP1-202ENST00000371146 DEFB126Q9BYW3 111 aa6.68□□□□□ -1.34
USP1-202ENST00000371146 KLHL31Q9H511 634 aa6.68□□□□□ -1.34
USP1-202ENST00000371146 KCNK13Q9HB14 408 aa6.68□□□□□ -1.34
USP1-202ENST00000371146 PLCL2Q9UPR0 1127 aa6.68□□□□□ -1.34
USP1-202ENST00000371146 WNK2Q9Y3S1 2297 aa6.68□□□□□ -1.34
USP1-202ENST00000371146 DLX3O60479 287 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 IPO13O94829 963 aaKnown RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 INMTO95050 263 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 HMGN1P05114 100 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 ALOX12P18054 663 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 ATP5F1P24539 256 aaPredicted RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 HOXA6P31267 233 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 HSPA13P48723 471 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 VBP1P61758 197 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 PRDX1Q06830 199 aaKnown RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 FAPQ12884 760 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 SLAMF1Q13291 335 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 ARL13AQ5H913 290 aaPredicted RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 NIPAL1Q6NVV3 410 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 DHRS4L2Q6PKH6 230 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 IL20RBQ6UXL0 311 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 IKBIPQ70UQ0 350 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 AKAP14Q86UN6 197 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 CLEC4FQ8N1N0 589 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 RNF148Q8N7C7 305 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 CCDC197Q8NCU1 140 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 OR8H1Q8NGG4 311 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 FAM110BQ8TC76 370 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 TSLPQ969D9 159 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 SH3YL1Q96HL8 342 aaPredicted RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 SPNS1Q9H2V7 528 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 NTN4Q9HB63 628 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 C1GALT1Q9NS00 363 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 GPRC5BQ9NZH0 403 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 CCDC167Q9P0B6 97 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 ENTPD4Q9Y227 616 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 RUVBL1Q9Y265 456 aaKnown RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 MRPS2Q9Y399 296 aaKnown RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 TRIM77I1YAP6 450 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 BET1O15155 118 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 NPPAP01160 153 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 COX7A2P14406 83 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 ZNF10P21506 573 aaPredicted RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 AQP1P29972 269 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 GNALP38405 381 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 HTR6P50406 440 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 CLCN7P51798 805 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 C21orf58P58505 322 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 KCNJ2P63252 427 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 CDC20Q12834 499 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 NPTX1Q15818 432 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 BTN2A1Q7KYR7 527 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 ZNF248Q8NDW4 579 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 STT3BQ8TCJ2 826 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 ASB11Q8WXH4 323 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 ASB12Q8WXK4 309 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 C11orf24Q96F05 449 aaPredicted RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 COX14Q96I36 57 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 THOC3Q96J01 351 aaKnown RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 MRPL57Q9BQC6 102 aaKnown RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 GATA5Q9BWX5 397 aaPredicted RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 FAM117AQ9C073 453 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 PITHD1Q9GZP4 211 aaPredicted RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 ACTL8Q9H568 366 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 PLGRKTQ9HBL7 147 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 CTPS2Q9NRF8 586 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 DDX18Q9NVP1 670 aaKnown RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 CDC14AQ9UNH5 594 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 LHX6Q9UPM6 363 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 FARSAQ9Y285 508 aaKnown RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 NSG1A0A0A6YYJ2 146 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 SLC5A10A0PJK1 596 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 A8MT66 165 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 E2F3O00716 465 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 KLHL18O94889 574 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 CD1DP15813 335 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 PTGS2P35354 604 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 LIMK1P53667 647 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 DCDC1P59894 354 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 NAA20P61599 178 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 NCALDP61601 193 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 SKP1P63208 163 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 DCDP81605 110 aaKnown RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 MC1RQ01726 317 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 SRYQ05066 204 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 SLC14A1Q13336 389 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 ELOAQ14241 798 aaKnown RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 B3GNTL1Q67FW5 361 aaPredicted RBP6.67□□□□□ -1.34
USP1-202ENST00000371146 SULT1C3Q6IMI6 304 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 LANCL3Q6ZV70 420 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 GOLGA7Q7Z5G4 137 aa6.67□□□□□ -1.34
USP1-202ENST00000371146 ISCA2Q86U28 154 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms