RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PTGDR2Q9Y5Y4 395 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 C5P01031 1676 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 F5H0A9 414 aaPredicted RBP18.92■□□□□ 0.62
SHANK1-203ENST00000391813 PLATP00750 562 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 GPX3P22352 226 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 RABGGTBP53611 331 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 SCAPQ12770 1279 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 SCGB2B2Q4G0G5 96 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 ADGRF1Q5T601 910 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 TAS1R3Q7RTX0 852 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 LHFPL3Q86UP9 236 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 RNF130Q86XS8 419 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 TMEM102Q8N9M5 508 aaPredicted RBP18.92■□□□□ 0.62
SHANK1-203ENST00000391813 S100PBPQ96BU1 408 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 MRGPRX2Q96LB1 330 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 PLEKHA1Q9HB21 404 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 EMCNQ9ULC0 261 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 IGKV6D-21A0A0A0MT36 114 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 SAP18O00422 153 aaKnown RBP18.92■□□□□ 0.62
SHANK1-203ENST00000391813 MITFO75030 526 aaPredicted RBP18.92■□□□□ 0.62
SHANK1-203ENST00000391813 KAT7O95251 611 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 EIF2DP41214 584 aaKnown RBP18.92■□□□□ 0.62
SHANK1-203ENST00000391813 GHRHRQ02643 423 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 SPCS2Q15005 226 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 NKD1Q969G9 470 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 C5orf34Q96MH7 638 aa18.92■□□□□ 0.62
SHANK1-203ENST00000391813 NDRG2Q9UN36 371 aaKnown RBP18.92■□□□□ 0.62
SHANK1-203ENST00000391813 PRKCGP05129 697 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 ZNF823P16415 610 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 ZNF14P17017 642 aaPredicted RBP18.91■□□□□ 0.62
SHANK1-203ENST00000391813 ZNF26P17031 533 aaPredicted RBP18.91■□□□□ 0.62
SHANK1-203ENST00000391813 AGXTP21549 392 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 OXTRP30559 389 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 KLHL26Q53HC5 615 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 TICAM1Q8IUC6 712 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 OR2L5Q8NG80 312 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 OR8K5Q8NH50 307 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 POTEKPQ9BYX7 375 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 NT5DC2Q9H857 520 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 ACOT13Q9NPJ3 140 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 PCDHB16Q9NRJ7 776 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 RHCGQ9UBD6 479 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 PRAMEF11O60813 436 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 LIPJQ5W064 366 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 CLDN19Q8N6F1 224 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 KRTCAP2Q8N6L1 136 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 OR56A1Q8NGH5 318 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 GPR151Q8TDV0 419 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 BADQ92934 168 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 PSKH2Q96QS6 385 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 GAL3ST1Q99999 423 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 METTL8Q9H825 291 aaKnown RBP18.91■□□□□ 0.62
SHANK1-203ENST00000391813 INSL5Q9Y5Q6 135 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 TEX13CA0A0J9YWL9 993 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 ZNF670-ZNF695F2Z2N8 137 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 HAPLN1P10915 354 aaPredicted RBP18.91■□□□□ 0.62
SHANK1-203ENST00000391813 PSMD8P48556 350 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 CCR8P51685 355 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 TAS2R50P59544 299 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 MAD2L1BPQ15013 274 aaPredicted RBP18.91■□□□□ 0.62
SHANK1-203ENST00000391813 SF3A2Q15428 464 aaKnown RBP18.91■□□□□ 0.62
SHANK1-203ENST00000391813 MAFFQ9ULX9 164 aa18.91■□□□□ 0.62
SHANK1-203ENST00000391813 B4GAT1O43505 415 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 CDC40O60508 579 aaKnown RBP eCLIP18.9■□□□□ 0.62
SHANK1-203ENST00000391813 ITGAMP11215 1152 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 GRK5P34947 590 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 GMPRP36959 345 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 SELPLGQ14242 412 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 AGTRAPQ6RW13 159 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 FAM124AQ86V42 546 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 OR2L2Q8NH16 312 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 OVCA2Q8WZ82 227 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 SLC2A13Q96QE2 648 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 RAB11FIP5Q9BXF6 653 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 SCML2Q9UQR0 700 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 NHSQ6T4R5 1651 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 TEX51A0A1B0GUA7 166 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 HNRNPA1P09651 372 aaKnown RBP eCLIP18.9■□□□□ 0.62
SHANK1-203ENST00000391813 UGT2B10P36537 528 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 CASP3P42574 277 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 RPS24P62847 133 aaKnown RBP18.9■□□□□ 0.62
SHANK1-203ENST00000391813 ACTC1P68032 377 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 ACTA1P68133 377 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 TBCEQ15813 527 aaPredicted RBP18.9■□□□□ 0.62
SHANK1-203ENST00000391813 PRAMEF14Q5SWL7 426 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 PRAMEF13Q5VWM6 474 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 ZNF366Q8N895 744 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 IRF7Q92985 503 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 SECISBP2Q96T21 854 aaKnown RBP18.9■□□□□ 0.62
SHANK1-203ENST00000391813 PTPN18Q99952 460 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 GORASP2Q9H8Y8 452 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 COLEC10Q9Y6Z7 277 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 IGKV6-21A0A0C4DH24 114 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 UQCRC2P22695 453 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 OR51G2Q8NGK0 314 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 IRS2Q9Y4H2 1338 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 TTC24A2A3L6 582 aaPredicted RBP18.9■□□□□ 0.62
SHANK1-203ENST00000391813 INPPL1O15357 1258 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 ACVRL1P37023 503 aa18.9■□□□□ 0.62
SHANK1-203ENST00000391813 MAN2A2P49641 1150 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms