RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 AKAP6Q13023 2319 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 FAM166BA8MTA8 275 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 NPIPA2E9PIF3 369 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 NPIPA3F8WFD2 350 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 GOLGA8MH3BSY2 632 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 B3GALT2O43825 422 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 H2AFYO75367 372 aaKnown RBP8.47□□□□□ -1.05
CPSF4-211ENST00000471455 PDE9AO76083 593 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 GUCA1CO95843 209 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 F7P08709 466 aaPredicted RBP8.47□□□□□ -1.05
CPSF4-211ENST00000471455 DRD2P14416 443 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 SAT1P21673 171 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 DNASE1P24855 282 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 CDC25BP30305 580 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 MAGEA3P43357 314 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 HNMTP50135 292 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 IST1P53990 364 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 RAB38P57729 211 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 TGM3Q08188 693 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 TBL3Q12788 808 aaKnown RBP8.47□□□□□ -1.05
CPSF4-211ENST00000471455 BMPR2Q13873 1038 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 CRYMQ14894 314 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 RBBP5Q15291 538 aaKnown RBP8.47□□□□□ -1.05
CPSF4-211ENST00000471455 ELAVL1Q15717 326 aaKnown RBP8.47□□□□□ -1.05
CPSF4-211ENST00000471455 GXYLT1Q4G148 440 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 TOR1AIP1Q5JTV8 583 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 CATSPEREQ5SY80 951 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 WLSQ5T9L3 541 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 ZNF585AQ6P3V2 769 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 NXPE4Q6UWF7 544 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 HSDL2Q6YN16 418 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 MDGA2Q7Z553 956 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 GALNT7Q86SF2 657 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 SCUBE1Q8IWY4 988 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 PPIL6Q8IXY8 311 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 GOLM1Q8NBJ4 401 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 OR2M7Q8NG81 312 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 OR5L2Q8NGL0 311 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 OR14A16Q8NHC5 309 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 GRK7Q8WTQ7 553 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 MAGOHBQ96A72 148 aaKnown RBP8.47□□□□□ -1.05
CPSF4-211ENST00000471455 RMND5BQ96G75 393 aaPredicted RBP8.47□□□□□ -1.05
CPSF4-211ENST00000471455 TSNARE1Q96NA8 513 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 OR4K3Q96R72 315 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 POLDIP3Q9BY77 421 aaKnown RBP8.47□□□□□ -1.05
CPSF4-211ENST00000471455 TTTY12Q9BZ98 90 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 COPS7BQ9H9Q2 264 aaPredicted RBP8.47□□□□□ -1.05
CPSF4-211ENST00000471455 IL1RL2Q9HB29 575 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 NOP53Q9NZM5 478 aaKnown RBP8.47□□□□□ -1.05
CPSF4-211ENST00000471455 MYOTQ9UBF9 498 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 CLCA3PQ9Y6N3 262 aa8.47□□□□□ -1.05
CPSF4-211ENST00000471455 GOLGA6L10A0A0M3HER8 536 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 FAM229AH3BQW9 127 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 AQP7O14520 342 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 SUSD5O60279 629 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 OR2J2O76002 312 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 B3GALT4O96024 378 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 IGHG3P01860 377 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 IGHA1P01876 353 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 P04436 131 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 IFNA16P05015 189 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 CCDC175P0C221 793 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 SMIM10L1P0DMW3 83 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 GABRA1P14867 456 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 FOSL1P15407 271 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 GNAZP19086 355 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 MAN2A2P49641 1150 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 CDKN2DP55273 166 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 BTN3A2P78410 334 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 CCZ1BP86790 482 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 CCZ1P86791 482 aaPredicted RBP8.46□□□□□ -1.06
CPSF4-211ENST00000471455 HYAL2Q12891 473 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 EFTUD2Q15029 972 aaKnown RBP eCLIP8.46□□□□□ -1.063e-6■■■□□ 15.6
CPSF4-211ENST00000471455 EMC4Q5J8M3 183 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 SPANXN3Q5MJ09 141 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 C1orf185Q5T7R7 199 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 FAM45BPQ6NSW5 357 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 TRIM40Q6P9F5 258 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 OPN5Q6U736 354 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 ARSKQ6UWY0 536 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 IL20RBQ6UXL0 311 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 ZNF662Q6ZS27 426 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 FRA10AC1Q70Z53 315 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 THOC6Q86W42 341 aaKnown RBP8.46□□□□□ -1.06
CPSF4-211ENST00000471455 CNTN4Q8IWV2 1026 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 KRT78Q8N1N4 520 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 MORN4Q8NDC4 146 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 OR5M9Q8NGP3 310 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 OR8K3Q8NH51 312 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 GOT1L1Q8NHS2 421 aaPredicted RBP8.46□□□□□ -1.06
CPSF4-211ENST00000471455 FAM45AQ8TCE6 357 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 CCT6BQ92526 530 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 KIAA1191Q96A73 305 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 SMIM10Q96HG1 83 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 TTYH2Q9BSA4 534 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 ROGDIQ9GZN7 287 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 PITHD1Q9GZP4 211 aaPredicted RBP8.46□□□□□ -1.06
CPSF4-211ENST00000471455 LDAHQ9H6V9 325 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 EXO5Q9H790 373 aa8.46□□□□□ -1.06
CPSF4-211ENST00000471455 PNPLA3Q9NST1 481 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms