RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 HAS3O00219 553 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 TP53P04637 393 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 ENDOUP21128 410 aaKnown RBP10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 UBE2UQ5VVX9 321 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 LRRC3Q9BY71 257 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 TWSG1Q9GZX9 223 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 LOC102724200A0A096LPH7 203 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 SHISA7A6NL88 538 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 AHSA1O95433 338 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 TBX18O95935 607 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 GALTP07902 379 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 ZNF267Q14586 743 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 KIAA0930Q6ICG6 404 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 VHLLQ6RSH7 139 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 SLC16A9Q7RTY1 509 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 C6orf120Q7Z4R8 191 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 GATSQ8NAP1 163 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 ESAMQ96AP7 390 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 C16orf58Q96GQ5 468 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 SLC39A1Q9NY26 324 aa10.67□□□□□ -0.7
CACNA1C-215ENST00000399637 BLOC1S5-TXNDC5H3BN57 136 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 GNRHRP30968 328 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 DPP6P42658 865 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 CCL11P51671 97 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 LILRA4P59901 499 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 ST3GAL3Q11203 375 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 NIPAL1Q6NVV3 410 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 BRAT1Q6PJG6 821 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 RBMS3Q6XE24 437 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 ENDOVQ8N8Q3 282 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 DRAXINQ8NBI3 349 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 ITPAQ9BY32 194 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 RPH3ALQ9UNE2 315 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 MYOCOSA0A1B0GUC4 107 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 MYBPHLA2RUH7 354 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 SLC22A1O15245 554 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 FANCGO15287 622 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 IMPDH1P20839 514 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 SLC6A6P31641 620 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 CAMK2DQ13557 499 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 EIF2B1Q14232 305 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 LAS2Q8IYD9 372 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 GPR137CQ8N3F9 429 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 FANK1Q8TC84 345 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 NANOS1Q8WY41 292 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 SLCO2A1Q92959 643 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 TAMM41Q96BW9 452 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 WDR92Q96MX6 357 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 GSKIPQ9P0R6 139 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 ZNF451Q9Y4E5 1061 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 SOWAHBA6NEL2 793 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 UPK3BL1B0FP48 263 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 UPK3BL2E5RIL1 263 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 AIPO00170 330 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 PAK4O96013 591 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 HBQ1P09105 142 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 ZNF12P17014 697 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 TAS2R43P59537 309 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 KLF1Q13351 362 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 ABRAXAS2Q15018 415 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 RNF220Q5VTB9 566 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 GPN2Q9H9Y4 310 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 NGBQ9NPG2 151 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 TOR1BO14657 336 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 ARPC2O15144 300 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 VAMP1P23763 118 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 LMO2P25791 158 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 GCH1P30793 250 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 CHRNA4P43681 627 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 NCEH1Q6PIU2 408 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 SMARCD2Q92925 531 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 NKD2Q969F2 451 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 LRFN5Q96NI6 719 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 PRELID1Q9Y255 219 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 LOC102723532A0A0G2JNH3 316 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 WTIPA6NIX2 430 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 FTCDNL1E5RQL4 147 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 POP7O75817 140 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 CNOT4O95628 575 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 SOD2P04179 222 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 RPS24P62847 133 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 DLX2Q07687 328 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 PON3Q15166 354 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 RNF151Q2KHN1 245 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 DEFB133Q30KQ1 61 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 TPRG1LQ5T0D9 272 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 ALG3Q92685 438 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 S100A16Q96FQ6 103 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 ARL5BQ96KC2 179 aa10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 C12orf65Q9H3J6 166 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 PTRH2Q9Y3E5 179 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-215ENST00000399637 A0A1W2PPW3 197 aa10.65□□□□□ -0.7
CACNA1C-215ENST00000399637 TRBC2A0A5B9 178 aa10.65□□□□□ -0.7
CACNA1C-215ENST00000399637 SLC35F4A4IF30 521 aa10.65□□□□□ -0.7
CACNA1C-215ENST00000399637 M0R2N6 131 aa10.65□□□□□ -0.7
CACNA1C-215ENST00000399637 CLIC1O00299 241 aa10.65□□□□□ -0.7
CACNA1C-215ENST00000399637 ARL6IP5O75915 188 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms