RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 TRIM64A6NGJ6 449 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 TRIM64BA6NI03 449 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 CLCA1A8K7I4 914 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 HSPB2A8KAH6 182 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 FAM171A2A8MVW0 826 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 EEF1E1-BLOC1S5C9J1V9 151 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 CDK2AP1O14519 115 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 AQP7O14520 342 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 ARHGEF9O43307 516 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 EEF1E1O43324 174 aaKnown RBP10.77□□□□□ -0.69
SDCBP-211ENST00000523441 NRDCO43847 1150 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 AVILO75366 819 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 ZFAND5O76080 213 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 LRATO95237 230 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 P04436 131 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 IFNA16P05015 189 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 MPC1LP0DKB6 136 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 CD53P19397 219 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 CNR1P21554 472 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 RPL22P35268 128 aaKnown RBP10.77□□□□□ -0.69
SDCBP-211ENST00000523441 PIGAP37287 484 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 SKP1P63208 163 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 SLC13A2Q13183 592 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 CTBP1Q13363 440 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 RPS6KA1Q15418 735 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 HSPB2Q16082 182 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 TOR1AIP1Q5JTV8 583 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 CATSPEREQ5SY80 951 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 NDUFAF5Q5TEU4 345 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 ZNF470Q6ECI4 717 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 CASC4Q6P4E1 433 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 CENPUQ71F23 418 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 ABHD13Q7L211 337 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 CTAGE6Q86UF2 777 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 UBL4BQ8N7F7 174 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 PEX13Q92968 403 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 SCYL1Q96KG9 808 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 TSNARE1Q96NA8 513 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 RASL10BQ96S79 203 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 SLC6A15Q9H2J7 730 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 SPNS1Q9H2V7 528 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 KLHL31Q9H511 634 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 PLEKHF2Q9H8W4 249 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 IL1RL2Q9HB29 575 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 FAM47E-STBD1D6RA91 191 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 TGFBR3LH3BV60 316 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 GFYI3L273 518 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 LIASO43766 372 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 GLSO94925 669 aaPredicted RBP10.76□□□□□ -0.69
SDCBP-211ENST00000523441 IGHG3P01860 377 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 CCL3P10147 92 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 EPXP11678 715 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 ENDOUP21128 410 aaKnown RBP10.76□□□□□ -0.69
SDCBP-211ENST00000523441 CYLC1P35663 651 aaPredicted RBP10.76□□□□□ -0.69
SDCBP-211ENST00000523441 SKIV2L2P42285 1042 aaKnown RBP10.76□□□□□ -0.69
SDCBP-211ENST00000523441 CCR8P51685 355 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 BTN3A2P78410 334 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 KLF1Q13351 362 aaPredicted RBP10.76□□□□□ -0.69
SDCBP-211ENST00000523441 RBBP5Q15291 538 aaKnown RBP10.76□□□□□ -0.69
SDCBP-211ENST00000523441 PRAMEF20Q5VT98 475 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 SHEQ5VZ18 495 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 NEPROQ6NW34 567 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 CYHR1Q6ZMK1 362 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 RTL4Q6ZR62 310 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 RGS9BPQ6ZS82 235 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 SEM1Q6ZVN7 128 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 DENND6AQ8IWF6 608 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 PALM2Q8IXS6 379 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 CA13Q8N1Q1 262 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 LIX1Q8N485 282 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 AFAP1L2Q8N4X5 818 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 ZNF321PQ8N8H1 164 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 FAM47BQ8NA70 645 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 UTP15Q8TED0 518 aaKnown RBP10.76□□□□□ -0.69
SDCBP-211ENST00000523441 CCT6BQ92526 530 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 IL22Q9GZX6 179 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 PCBD2Q9H0N5 130 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 PRTFDC1Q9NRG1 225 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 SACM1LQ9NTJ5 587 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 MTRF1LQ9UGC7 380 aaKnown RBP10.76□□□□□ -0.69
SDCBP-211ENST00000523441 PDE10AQ9Y233 779 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 ZANQ9Y493 2812 aa10.76□□□□□ -0.69
SDCBP-211ENST00000523441 NINQ8N4C6 2090 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 IGKV3D-11A0A0A0MRZ8 115 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 C15orf38-AP3S2A0A0A6YYH1 394 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 RNF212BA8MTL3 300 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 C4orf51C9J302 202 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 SMPD2O60906 423 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 GABRA1P14867 456 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 NPPBP16860 134 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 TNNI3P19429 210 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 STIP1P31948 543 aaKnown RBP10.75□□□□□ -0.69
SDCBP-211ENST00000523441 PEX19P40855 299 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 NPY2RP49146 381 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 HNRNPFP52597 415 aaKnown RBP10.75□□□□□ -0.69
SDCBP-211ENST00000523441 HK2P52789 917 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 KCNJ2P63252 427 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 CCZ1BP86790 482 aa10.75□□□□□ -0.69
SDCBP-211ENST00000523441 CCZ1P86791 482 aaPredicted RBP10.75□□□□□ -0.69
SDCBP-211ENST00000523441 CBLBQ13191 982 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms