RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CHRFAM7AQ494W8 412 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 CBWD6Q4V339 395 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 CEP78Q5JTW2 689 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 CBWD3Q5JTY5 395 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 DNTTIP2Q5QJE6 756 aaKnown RBP3.54□□□□□ -1.84
HERC1-211ENST00000560983 CBWD5Q5RIA9 395 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 TMTC4Q5T4D3 741 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 CFAP58Q5T655 872 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 FAM72AQ5TYM5 149 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 SFRP4Q6FHJ7 346 aaPredicted RBP3.54□□□□□ -1.84
HERC1-211ENST00000560983 FAM72DQ6L9T8 149 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 RHBDD2Q6NTF9 364 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 WASH2PQ6VEQ5 465 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 TRIM72Q6ZMU5 477 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 UNC13DQ70J99 1090 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 INTS8Q75QN2 995 aaKnown RBP3.54□□□□□ -1.84
HERC1-211ENST00000560983 BNIPLQ7Z465 357 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 SRLQ86TD4 932 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 TSPAN33Q86UF1 283 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 FAM72BQ86X60 149 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 EID3Q8N140 333 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 TTC30BQ8N4P2 665 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 EXD1Q8NHP7 514 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 FAM57AQ8TBR7 257 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 BRIX1Q8TDN6 353 aaKnown RBP3.54□□□□□ -1.84
HERC1-211ENST00000560983 FAM222BQ8WU58 562 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 ZBTB9Q96C00 473 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 WDR24Q96S15 920 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 PIP5K1AQ99755 562 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 NCAPGQ9BPX3 1015 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 C17orf62Q9BQA9 187 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 FSD1LQ9BXM9 530 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 QTRT1Q9BXR0 403 aaKnown RBP3.54□□□□□ -1.84
HERC1-211ENST00000560983 RETREG1Q9H6L5 497 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 RMI1Q9H9A7 625 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 PDFQ9HBH1 243 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 DUSP22Q9NRW4 184 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 POT1Q9NUX5 634 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 SEPT11Q9NVA2 429 aaKnown RBP3.54□□□□□ -1.84
HERC1-211ENST00000560983 TMEM248Q9NWD8 314 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 HRASLS2Q9NWW9 162 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 GOLGA6AQ9NYA3 693 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 VPS18Q9P253 973 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 IFT80Q9P2H3 777 aaPredicted RBP3.54□□□□□ -1.84
HERC1-211ENST00000560983 SERTAD3Q9UJW9 196 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 CDC23Q9UJX2 597 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 NOCTQ9UK39 431 aaKnown RBP3.54□□□□□ -1.84
HERC1-211ENST00000560983 WDR37Q9Y2I8 494 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 MRPS2Q9Y399 296 aaKnown RBP3.54□□□□□ -1.84
HERC1-211ENST00000560983 MRFAP1Q9Y605 127 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 CLIC4Q9Y696 253 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 HYDINQ4G0P3 5121 aa3.54□□□□□ -1.84
HERC1-211ENST00000560983 GTF3C1Q12789 2109 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 OR5H15A6NDH6 313 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 NPIPB15A6NHN6 443 aaPredicted RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 J3KR12 359 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 PSMD11O00231 422 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 TLX2O43763 284 aaPredicted RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 SMPD2O60906 423 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 DNAJB6O75190 326 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 BMP15O95972 392 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 HPP00738 406 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 PDHA1P08559 390 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 HBQ1P09105 142 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 PIM1P11309 404 aaPredicted RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 ZNF8P17098 575 aaPredicted RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 NDUFB7P17568 137 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 MPGP29372 298 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 SERPINA4P29622 427 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 PPIFP30405 207 aaKnown RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 DRG2P55039 364 aaKnown RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 EEFSECP57772 596 aaKnown RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 ANAPC15P60006 121 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 CEBPZQ03701 1054 aaKnown RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 BCL2L1Q07817 233 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 NSUN2Q08J23 767 aaKnown RBP eCLIP3.53□□□□□ -1.84
HERC1-211ENST00000560983 LRMPQ12912 555 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 PDCLQ13371 301 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 PDCD2Q16342 344 aaPredicted RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 TUBB8Q3ZCM7 444 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 FAM174BQ3ZCQ3 159 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 NKAIN1Q4KMZ8 207 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 FILIP1LQ4L180 1135 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 ZNF766Q5HY98 468 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 ICE2Q659A1 982 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 SLC9A4Q6AI14 798 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 SLC18B1Q6NT16 456 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 HIBCHQ6NVY1 386 aaPredicted RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 FAM183BPQ6ZVS7 135 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 SLC29A4Q7RTT9 530 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 ZNF547Q8IVP9 402 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 GHDCQ8N2G8 530 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 SIRT6Q8N6T7 355 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 PDILTQ8N807 584 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 MAPK1IP1LQ8NDC0 245 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 ZNF397Q8NF99 534 aaPredicted RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 SGMS2Q8NHU3 365 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 TEKT4Q8WW24 435 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 AP2M1Q96CW1 435 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 SCRN2Q96FV2 425 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms