RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SVILO95425 2214 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 TRBC2A0A5B9 178 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 TTLL8A6PVC2 850 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 MYZAPP0CAP1 466 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ACPPP15309 386 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 AVPR1BP47901 424 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 GLRBP48167 497 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 EMP2P54851 167 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 Q0VFX4 171 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 C18orf21Q32NC0 220 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SLC6A19Q695T7 634 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 IGFL3Q6UXB1 125 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ISCA2Q86U28 154 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 TRABD2AQ86V40 505 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 PARP9Q8IXQ6 854 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 PLD6Q8N2A8 252 aaKnown RBP16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ZCCHC10Q8TBK6 192 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 RHBDF1Q96CC6 855 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 MOCOSQ96EN8 888 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 EGFL8Q99944 293 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ALG9Q9H6U8 611 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 VIPAS39Q9H9C1 493 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 LUZP4Q9P127 313 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 RNF112Q9ULX5 631 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SETXQ7Z333 2677 aaKnown RBP16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 HIVEP3Q5T1R4 2406 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 A0A1W2PQ72 361 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 FOXO6A8MYZ6 492 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 MAP2K7O14733 419 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 OR1F1O43749 312 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 BMP10O95393 424 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 HPP00738 406 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ALPPP05187 535 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SLC35G6P0C7Q6 338 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 COX6A1P12074 109 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 KRT4P19013 534 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 HNMTP50135 292 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 TGFBIQ15582 683 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 PDSS2Q86YH6 399 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 GPSM1Q86YR5 675 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SRRM1Q8IYB3 904 aaKnown RBP16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 RHEBL1Q8TAI7 183 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 PNPLA2Q96AD5 504 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 VPS50Q96JG6 964 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 STMN4Q9H169 189 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SENP1Q9P0U3 644 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 DCDC2Q9UHG0 476 aa16.91■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SGK494L7N484 410 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 KLHL41O60662 606 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 KERAO60938 352 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 JRKO75564 520 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 IPO13O94829 963 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 GSTA1P08263 222 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 RBP1P09455 135 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 GDF5P43026 501 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SCTRP47872 440 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SLC6A12P48065 614 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 CCT5P48643 541 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 REEP5Q00765 189 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 OR4D1Q15615 310 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 FAAH2Q6GMR7 532 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 TMPRSS11BQ86T26 416 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ZBTB9Q96C00 473 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 PGM2Q96G03 612 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SCYL1Q96KG9 808 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 GPR78Q96P69 363 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 PELI2Q9HAT8 420 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ZNF358Q9NW07 568 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 DYRK1BQ9Y463 629 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SLC22A7Q9Y694 548 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 LRRK2Q5S007 2527 aa16.9■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ZGRF1Q86YA3 2104 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 NCF1BA6NI72 391 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 SYCE1LA8MT33 242 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 NCF1CA8MVU1 366 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 NDUFS4O43181 175 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 GLRA3O75311 464 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 HEXBP07686 556 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 NCF1P14598 390 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 TMEM205Q6UW68 189 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 NXPE4Q6UWF7 544 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 SH2D5Q6ZV89 423 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 KLHDC8AQ8IYD2 350 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 C4orf33Q8N1A6 199 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 AFAP1L2Q8N4X5 818 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 ANKRD53Q8N9V6 530 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 OR51Q1Q8NH59 317 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 CPT1CQ8TCG5 803 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 EXT2Q93063 718 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 THOC3Q96J01 351 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 SMC6Q96SB8 1091 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 LHPPQ9H008 270 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 ZNF160Q9HCG1 818 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 ANKHQ9HCJ1 492 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 HCN3Q9P1Z3 774 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 ZFP69BQ9UJL9 534 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 MKL2Q9ULH7 1088 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 KCNE2Q9Y6J6 123 aa16.89■□□□□ 0.29
TNFRSF1A-209ENST00000536717 LOC102723996A0A087X1L8 192 aa16.88■□□□□ 0.29
TNFRSF1A-209ENST00000536717 IGHV1-45A0A0A0MS14 117 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms