RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 ADGRE2Q9UHX3 823 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 LRIT2A6NDA9 550 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 ZNF860A6NHJ4 632 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 PLD2O14939 933 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 ERI3O43414 337 aaKnown RBP12.48□□□□□ -0.41
CNOT4-204ENST00000414802 SRPX2O60687 465 aaPredicted RBP12.48□□□□□ -0.41
CNOT4-204ENST00000414802 DIAPH2O60879 1101 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 MSL3P1P0C860 447 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 IL1RNP18510 177 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 DRD4P21917 467 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 GSTM2P28161 218 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 EPHA3P29320 983 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 RAP1GDS1P52306 607 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 PLA2G16P53816 162 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 FOXC1Q12948 553 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 PWP1Q13610 501 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 TCTE1Q5JU00 501 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 SPDYAQ5MJ70 313 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 PWWP2BQ6NUJ5 590 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 Q6ZSR9 355 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 UBE3DQ7Z6J8 389 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 PPP1R3BQ86XI6 285 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 TMEM126BQ8IUX1 230 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 KIRREL3Q8IZU9 778 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 MS4A6EQ96DS6 147 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 APIPQ96GX9 242 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 SERPINI1Q99574 410 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 C17orf62Q9BQA9 187 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 EBF4Q9BQW3 602 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 REXO4Q9GZR2 422 aaKnown RBP12.48□□□□□ -0.41
CNOT4-204ENST00000414802 MEAF6Q9HAF1 191 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 BRF2Q9HAW0 419 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 VTI1BQ9UEU0 232 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 SERTAD3Q9UJW9 196 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 CCL27Q9Y4X3 112 aa12.48□□□□□ -0.41
CNOT4-204ENST00000414802 CEP295Q9C0D2 2601 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 NUP214P35658 2090 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 FITM1A5D6W6 292 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 GMNCA6NCL1 334 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 B4E171 279 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 SLCO1B7G3V0H7 640 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 SLC28A1O00337 649 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 PLPP1O14494 284 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 POLR1CO15160 346 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 ZNF749O43361 778 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 RGS14O43566 566 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 SHOX2O60902 331 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 TROVE2P10155 538 aaKnown RBP eCLIP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 HSD3B1P14060 373 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 ALOX15P16050 662 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 HSD3B2P26439 372 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 TSPAN7P41732 249 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 HK2P52789 917 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 STXBP1P61764 594 aaKnown RBP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 ADPRMQ3LIE5 342 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 C10orf62Q5T681 223 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 DEPDC1Q5TB30 811 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 TMEM214Q6NUQ4 689 aaKnown RBP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 ZNF793Q6ZN11 406 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 TMPRSS7Q7RTY8 843 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 TRIM46Q7Z4K8 759 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 MTERF4Q7Z6M4 381 aaKnown RBP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 ARHGEF39Q8N4T4 335 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 C1orf52Q8N6N3 182 aaKnown RBP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 GBP7Q8N8V2 638 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 WDR36Q8NI36 951 aaKnown RBP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 UTP15Q8TED0 518 aaKnown RBP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 GAL3ST3Q96A11 431 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 TUBGCP3Q96CW5 907 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 SEC16BQ96JE7 1060 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 OR52B2Q96RD2 323 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 C1orf50Q9BV19 199 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 EBPLQ9BY08 206 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 TRIM55Q9BYV6 548 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 CUTCQ9NTM9 273 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 DHCR7Q9UBM7 475 aaKnown RBP12.47□□□□□ -0.41
CNOT4-204ENST00000414802 VPS29Q9UBQ0 182 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 NDOR1Q9UHB4 597 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 PPT2Q9UMR5 302 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 B3GALT1Q9Y5Z6 326 aa12.47□□□□□ -0.41
CNOT4-204ENST00000414802 A0A0G2JND7 137 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 SERTM1A2A2V5 107 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 HYKKA2RU49 373 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 TRPC5OSA6NMA1 111 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 LSM1O15116 133 aaKnown RBP12.46□□□□□ -0.41
CNOT4-204ENST00000414802 PEX11AO75192 247 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 SCRG1O75711 98 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 GBAP04062 536 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 FGF5P12034 268 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 ZNF28P17035 718 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 PTX3P26022 381 aaPredicted RBP12.46□□□□□ -0.41
CNOT4-204ENST00000414802 CERS1P27544 350 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 SSR2P43308 183 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 RPL38P63173 70 aaKnown RBP12.46□□□□□ -0.41
CNOT4-204ENST00000414802 TBL3Q12788 808 aaKnown RBP12.46□□□□□ -0.41
CNOT4-204ENST00000414802 PUM1Q14671 1186 aaKnown RBP eCLIP12.46□□□□□ -0.414e-8■■■□□ 18.6
CNOT4-204ENST00000414802 GRM7Q14831 915 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 DEFB134Q4QY38 66 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 C1orf189Q5VU69 101 aa12.46□□□□□ -0.41
CNOT4-204ENST00000414802 NXNQ6DKJ4 435 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms