RNA–Protein interactions for RNA: ENST00000380691.2

MSL3-204, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-204ENST00000380691 RASSF7Q02833 373 aa8.3□□□□□ -1.08
MSL3-204ENST00000380691 FAM212AQ96EL1 285 aa8.3□□□□□ -1.08
MSL3-204ENST00000380691 KIF13BQ9NQT8 1826 aa8.3□□□□□ -1.08
MSL3-204ENST00000380691 MAP2K1Q02750 393 aaPredicted RBP8.29□□□□□ -1.08
MSL3-204ENST00000380691 NBPF1Q3BBV0 1214 aa8.29□□□□□ -1.08
MSL3-204ENST00000380691 RAPGEF4Q8WZA2 1011 aa8.29□□□□□ -1.08
MSL3-204ENST00000380691 SBNO2Q9Y2G9 1366 aa8.29□□□□□ -1.08
MSL3-204ENST00000380691 CD163L1Q9NR16 1453 aa8.29□□□□□ -1.08
MSL3-204ENST00000380691 FAM208AQ9UK61 1670 aaKnown RBP8.29□□□□□ -1.08
MSL3-204ENST00000380691 PASKQ96RG2 1323 aa8.29□□□□□ -1.08
MSL3-204ENST00000380691 POTECB2RU33 542 aa8.28□□□□□ -1.08
MSL3-204ENST00000380691 GYS1P13807 737 aa8.28□□□□□ -1.08
MSL3-204ENST00000380691 GSE1Q14687 1217 aa8.28□□□□□ -1.08
MSL3-204ENST00000380691 TRAPPC3LQ5T215 181 aa8.28□□□□□ -1.08
MSL3-204ENST00000380691 DPY19L2Q6NUT2 758 aa8.28□□□□□ -1.08
MSL3-204ENST00000380691 MS4A3Q96HJ5 214 aa8.28□□□□□ -1.08
MSL3-204ENST00000380691 RTCBQ9Y3I0 505 aaKnown RBP8.28□□□□□ -1.08
MSL3-204ENST00000380691 RTL1A6NKG5 1358 aa8.27□□□□□ -1.09
MSL3-204ENST00000380691 C4AP0C0L4 1744 aa8.27□□□□□ -1.09
MSL3-204ENST00000380691 TMEM88BA6NKF7 163 aa8.27□□□□□ -1.09
MSL3-204ENST00000380691 TATP17735 454 aaPredicted RBP8.27□□□□□ -1.09
MSL3-204ENST00000380691 HOXC9P31274 260 aa8.27□□□□□ -1.09
MSL3-204ENST00000380691 ITPK1Q13572 414 aa8.27□□□□□ -1.09
MSL3-204ENST00000380691 DCAF8Q5TAQ9 597 aa8.27□□□□□ -1.09
MSL3-204ENST00000380691 PRPF38BQ5VTL8 546 aaKnown RBP8.27□□□□□ -1.09
MSL3-204ENST00000380691 PIGBQ92521 554 aa8.27□□□□□ -1.09
MSL3-204ENST00000380691 UBR3Q6ZT12 1888 aa8.27□□□□□ -1.09
MSL3-204ENST00000380691 RASSF10A6NK89 507 aa8.26□□□□□ -1.09
MSL3-204ENST00000380691 CHRNA5P30532 468 aa8.26□□□□□ -1.09
MSL3-204ENST00000380691 ATP6V1AP38606 617 aa8.26□□□□□ -1.09
MSL3-204ENST00000380691 EDC4Q6P2E9 1401 aaKnown RBP8.26□□□□□ -1.09
MSL3-204ENST00000380691 SMG6Q86US8 1419 aaKnown RBP8.26□□□□□ -1.09
MSL3-204ENST00000380691 MAP3K19Q56UN5 1328 aa8.26□□□□□ -1.09
MSL3-204ENST00000380691 N4BP2Q86UW6 1770 aaPredicted RBP8.25□□□□□ -1.09
MSL3-204ENST00000380691 POTEB2H3BUK9 544 aa8.25□□□□□ -1.09
MSL3-204ENST00000380691 CYP27B1O15528 508 aa8.25□□□□□ -1.09
MSL3-204ENST00000380691 POTEJP0CG39 1038 aa8.25□□□□□ -1.09
MSL3-204ENST00000380691 RFC4P35249 363 aa8.25□□□□□ -1.09
MSL3-204ENST00000380691 AMPHP49418 695 aa8.25□□□□□ -1.09
MSL3-204ENST00000380691 LDHDQ86WU2 507 aa8.25□□□□□ -1.09
MSL3-204ENST00000380691 ARHGEF1Q92888 912 aaKnown RBP8.25□□□□□ -1.09
MSL3-204ENST00000380691 KIF12Q96FN5 646 aa8.25□□□□□ -1.09
MSL3-204ENST00000380691 BEGAINQ9BUH8 593 aa8.25□□□□□ -1.09
MSL3-204ENST00000380691 CIZ1Q9ULV3 898 aaPredicted RBP8.25□□□□□ -1.09
MSL3-204ENST00000380691 PDE4DIPQ5VU43 2346 aa8.25□□□□□ -1.09
MSL3-204ENST00000380691 KAT6BQ8WYB5 2073 aa8.25□□□□□ -1.09
MSL3-204ENST00000380691 TAF1LQ8IZX4 1826 aa8.24□□□□□ -1.09
MSL3-204ENST00000380691 ARFGEF1Q9Y6D6 1849 aa8.24□□□□□ -1.09
MSL3-204ENST00000380691 KDRP35968 1356 aa8.24□□□□□ -1.09
MSL3-204ENST00000380691 IQCA1LA6NCM1 817 aa8.24□□□□□ -1.09
MSL3-204ENST00000380691 NBPF6Q5VWK0 638 aa8.24□□□□□ -1.09
MSL3-204ENST00000380691 HDGFL2Q7Z4V5 671 aaPredicted RBP8.24□□□□□ -1.09
MSL3-204ENST00000380691 USHBP1Q8N6Y0 703 aa8.24□□□□□ -1.09
MSL3-204ENST00000380691 NBPF4Q96M43 638 aa8.24□□□□□ -1.09
MSL3-204ENST00000380691 MCOLN1Q9GZU1 580 aa8.24□□□□□ -1.09
MSL3-204ENST00000380691 TMOD3Q9NYL9 352 aa8.24□□□□□ -1.09
MSL3-204ENST00000380691 CNTNAP4Q9C0A0 1308 aa8.24□□□□□ -1.09
MSL3-204ENST00000380691 WDR33Q9C0J8 1336 aaKnown RBP8.24□□□□□ -1.09
MSL3-204ENST00000380691 LTN1O94822 1766 aa8.23□□□□□ -1.09
MSL3-204ENST00000380691 NFKBIEO00221 500 aa8.23□□□□□ -1.09
MSL3-204ENST00000380691 MAP3K13O43283 966 aa8.23□□□□□ -1.09
MSL3-204ENST00000380691 DDR1Q08345 913 aa8.23□□□□□ -1.09
MSL3-204ENST00000380691 NKX1-1Q15270 411 aaPredicted RBP8.23□□□□□ -1.09
MSL3-204ENST00000380691 DEFB115Q30KQ5 88 aa8.23□□□□□ -1.09
MSL3-204ENST00000380691 RC3H1Q5TC82 1133 aaKnown RBP8.23□□□□□ -1.09
MSL3-204ENST00000380691 BRCA1P38398 1863 aaKnown RBP8.23□□□□□ -1.09
MSL3-204ENST00000380691 MON2Q7Z3U7 1717 aa8.23□□□□□ -1.09
MSL3-204ENST00000380691 RPS6KA4O75676 772 aa8.22□□□□□ -1.09
MSL3-204ENST00000380691 ASAP1Q9ULH1 1129 aa8.22□□□□□ -1.09
MSL3-204ENST00000380691 ITGBL1O95965 494 aaPredicted RBP8.21□□□□□ -1.1
MSL3-204ENST00000380691 BRPF1P55201 1214 aaPredicted RBP8.21□□□□□ -1.1
MSL3-204ENST00000380691 ERFEQ4G0M1 354 aa8.21□□□□□ -1.1
MSL3-204ENST00000380691 TTLL6Q8N841 843 aa8.21□□□□□ -1.1
MSL3-204ENST00000380691 COG3Q96JB2 828 aa8.21□□□□□ -1.1
MSL3-204ENST00000380691 PCDHB13Q9Y5F0 798 aa8.21□□□□□ -1.1
MSL3-204ENST00000380691 USP42Q9H9J4 1324 aaKnown RBP8.21□□□□□ -1.1
MSL3-204ENST00000380691 RAB3GAP2Q9H2M9 1393 aa8.21□□□□□ -1.1
MSL3-204ENST00000380691 POLRMTO00411 1230 aaKnown RBP8.2□□□□□ -1.1
MSL3-204ENST00000380691 CA12O43570 354 aa8.2□□□□□ -1.1
MSL3-204ENST00000380691 ECE1P42892 770 aa8.2□□□□□ -1.1
MSL3-204ENST00000380691 L3MBTL3Q96JM7 780 aaPredicted RBP8.2□□□□□ -1.1
MSL3-204ENST00000380691 TAF1DQ9H5J8 278 aaPredicted RBP8.2□□□□□ -1.1
MSL3-204ENST00000380691 ATG3Q9NT62 314 aa8.2□□□□□ -1.1
MSL3-204ENST00000380691 TERF2IPQ9NYB0 399 aa8.2□□□□□ -1.1
MSL3-204ENST00000380691 ABT1Q9ULW3 272 aaKnown RBP8.2□□□□□ -1.1
MSL3-204ENST00000380691 A0A1W2PP64 1363 aa8.2□□□□□ -1.1
MSL3-204ENST00000380691 THSD7BQ9C0I4 1608 aa8.19□□□□□ -1.1
MSL3-204ENST00000380691 DDNO94850 711 aaPredicted RBP8.19□□□□□ -1.1
MSL3-204ENST00000380691 TMC1Q8TDI8 760 aa8.19□□□□□ -1.1
MSL3-204ENST00000380691 GCC1Q96CN9 775 aa8.19□□□□□ -1.1
MSL3-204ENST00000380691 SPG7Q9UQ90 795 aa8.19□□□□□ -1.1
MSL3-204ENST00000380691 TIAM2Q8IVF5 1701 aa8.19□□□□□ -1.1
MSL3-204ENST00000380691 LTBP3Q9NS15 1303 aa8.19□□□□□ -1.1
MSL3-204ENST00000380691 MAP2P11137 1827 aaKnown RBP8.19□□□□□ -1.1
MSL3-204ENST00000380691 CHRM1P11229 460 aaPredicted RBP8.18□□□□□ -1.1
MSL3-204ENST00000380691 DGKZQ13574 1117 aa8.18□□□□□ -1.1
MSL3-204ENST00000380691 CAPNS2Q96L46 248 aa8.18□□□□□ -1.1
MSL3-204ENST00000380691 SLC4A9Q96Q91 983 aa8.18□□□□□ -1.1
MSL3-204ENST00000380691 SRP68Q9UHB9 627 aaKnown RBP8.18□□□□□ -1.1
MSL3-204ENST00000380691 INSRP06213 1382 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms