RNA–Protein interactions for RNA: ENST00000528906.5

PSMD13-208, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 858 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-208	ENST00000528906	LIMK1	P53667	647 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	ARF3	P61204	181 aa	Predicted RBP	12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	CYP4F2	P78329	520 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	CYP4F3	Q08477	520 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	ACSM2A	Q08AH3	577 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	TRA2A	Q13595	282 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	SPIDR	Q14159	915 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	RPS6KA2	Q15349	733 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	GALNTL6	Q49A17	601 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	TCTE1	Q5JU00	501 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	ACSM2B	Q68CK6	577 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	PAGE2	Q7Z2X7	111 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	ARHGAP22	Q7Z5H3	698 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	MTDH	Q86UE4	582 aa	Known RBP	12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	CPSF7	Q8N684	471 aa	Known RBP	12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	CHTF18	Q8WVB6	975 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	RGMA	Q96B86	450 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	SLC41A2	Q96JW4	573 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	NUDT22	Q9BRQ3	303 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	OR51B5	Q9H339	312 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	TMEM45A	Q9NWC5	275 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	ASIC5	Q9NY37	505 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	NOP53	Q9NZM5	478 aa	Known RBP	12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	KLHL3	Q9UH77	587 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	RUVBL1	Q9Y265	456 aa	Known RBP	12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	PCDHGA1	Q9Y5H4	931 aa		12.48	□□□□□ -0.41
PSMD13-208	ENST00000528906	TMX2-CTNND1	H3BSU7	103 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	FCHO1	O14526	889 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	NDUFS4	O43181	175 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	PRAMEF10	O60809	474 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	MSL3P1	P0C860	447 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	PRPS2	P11908	318 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	TSFM	P43897	325 aa	Known RBP	12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	ACADVL	P49748	655 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	RAP1GDS1	P52306	607 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	STX1B	P61266	288 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	TBL3	Q12788	808 aa	Known RBP	12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	KIAA0040	Q15053	153 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	ADPRM	Q3LIE5	342 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	RFTN2	Q52LD8	501 aa	Predicted RBP	12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	SNAP47	Q5SQN1	464 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	IL23R	Q5VWK5	629 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	FAM219B	Q5XKK7	198 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	ADNP2	Q6IQ32	1131 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	GALNT18	Q6P9A2	607 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	ZNF574	Q6ZN55	896 aa	Predicted RBP	12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	VN1R4	Q7Z5H5	301 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	PIP4P1	Q86T03	277 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	ALYREF	Q86V81	257 aa	Known RBP	12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	METTL4	Q8N3J2	472 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	D2HGDH	Q8N465	521 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	RNF175	Q8N4F7	328 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	OR2L5	Q8NG80	312 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	N4BP2L2	Q92802	583 aa	Predicted RBP	12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	APIP	Q96GX9	242 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	F2RL3	Q96RI0	385 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	TBCD	Q9BTW9	1192 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	SLC6A16	Q9GZN6	736 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	ROGDI	Q9GZN7	287 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	REXO4	Q9GZR2	422 aa	Known RBP	12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	ZNF768	Q9H5H4	540 aa	Known RBP	12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	SYNDIG1	Q9H7V2	258 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	FAM60A	Q9NP50	221 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	SAR1A	Q9NR31	198 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	ADAM29	Q9UKF5	820 aa		12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906	WBP11	Q9Y2W2	641 aa	Known RBP	12.47	□□□□□ -0.41
PSMD13-208	ENST00000528906		A0A088AWK7	358 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	LOC105369274	A0A096LPK9	316 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	LOC102723532	A0A0G2JNH3	316 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	IGHV5-10-1	A0A0J9YXX1	117 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906		D6RAR5	112 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	EBAG9	O00559	213 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	NRP2	O60462	931 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	ETHE1	O95571	254 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	TBX6	O95947	436 aa	Predicted RBP	12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	THRA	P10827	490 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	ZNF10	P21506	573 aa	Predicted RBP	12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	MRPL19	P49406	292 aa	Known RBP	12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	SEPHS1	P49903	392 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	EMP3	P54852	163 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	VSX2	P58304	361 aa	Predicted RBP	12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	RPL38	P63173	70 aa	Known RBP	12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	ACY1	Q03154	408 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	SQLE	Q14534	574 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	FRMPD2B	Q6IN97	320 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	NIPAL1	Q6NVV3	410 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	NOXRED1	Q6NXP6	359 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	TRIM40	Q6P9F5	258 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	ABHD13	Q7L211	337 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	TRPM8	Q7Z2W7	1104 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	GLRX5	Q86SX6	157 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	OR4N4	Q8N0Y3	316 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	CSNK1A1L	Q8N752	337 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	GAL3ST3	Q96A11	431 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	MS4A6E	Q96DS6	147 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	C11orf24	Q96F05	449 aa	Predicted RBP	12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	FCRL1	Q96LA6	429 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	ZNF285	Q96NJ3	590 aa		12.46	□□□□□ -0.41
PSMD13-208	ENST00000528906	TMEM74	Q96NL1	305 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms