RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 C5AR2Q9P296 337 aa16.85■□□□□ 0.29
CTDNEP1-207ENST00000572043 NSG1A0A0A6YYJ2 146 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 TRBC2A0A5B9 178 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 OR2W5A6NFC9 320 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 H0YIG0 161 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 WISP3O95389 354 aaPredicted RBP16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 BMP10O95393 424 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 NSA2O95478 260 aaKnown RBP16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 B3GALT4O96024 378 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 HPP00738 406 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 GSTA2P09210 222 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 COX6A1P12074 109 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 VARSP26640 1264 aaKnown RBP16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 STX2P32856 288 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 HNF4AP41235 474 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 EFNA3P52797 238 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 RBBP5Q15291 538 aaKnown RBP16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 WHAMMP3Q1A5X7 153 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 PLEKHN1Q494U1 663 aaPredicted RBP16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 ATG9BQ674R7 924 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 RAPH1Q70E73 1250 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 CMC1Q7Z7K0 106 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 PDSS2Q86YH6 399 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 HPS6Q86YV9 775 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 OR4K1Q8NGD4 311 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 OR51Q1Q8NH59 317 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 ANKRD7Q92527 254 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 EXT2Q93063 718 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 PNPLA2Q96AD5 504 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 TGIF2Q9GZN2 237 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 DERL2Q9GZP9 239 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 NAALAD2Q9Y3Q0 740 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 CSAG2Q9Y5P2 127 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 CFAP46Q8IYW2 2715 aa16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 TNRC6AQ8NDV7 1962 aaKnown RBP16.84■□□□□ 0.29
CTDNEP1-207ENST00000572043 CTAGE15A4D2H0 777 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 IPO13O94829 963 aaKnown RBP16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 KLHL18O94889 574 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 CELA2AP08217 269 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 SPRP35270 261 aaPredicted RBP16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 XCR1P46094 333 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 SOX8P57073 446 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 OLR1P78380 273 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 CDKL1Q00532 357 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 REEP5Q00765 189 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 TGFBIQ15582 683 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 INPP5JQ15735 1006 aaPredicted RBP16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 GRTP1Q5TC63 336 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 AGAP7PQ5VUJ5 663 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 NXPE4Q6UWF7 544 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 LINC00696Q6ZRV3 163 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 CYS1Q717R9 158 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 CTAGE6Q86UF2 777 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 ATCAYQ86WG3 371 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 ZADH2Q8N4Q0 377 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 TBC1D19Q8N5T2 526 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 OR5T3Q8NGG3 340 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 TM9SF4Q92544 642 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 ESAMQ96AP7 390 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 RHBDF1Q96CC6 855 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 AGAP4Q96P64 663 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 PHACTR1Q9C0D0 580 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 LHPPQ9H008 270 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 ILKAPQ9H0C8 392 aaPredicted RBP16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 WWOXQ9NZC7 414 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 KCNE2Q9Y6J6 123 aa16.83■□□□□ 0.28
CTDNEP1-207ENST00000572043 BOD1L1Q8NFC6 3051 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 IGHV3-20A0A0C4DH32 117 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 KLHL41O60662 606 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 VPS4BO75351 444 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 CDC123O75794 336 aaPredicted RBP16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 ZNF888P0CJ79 500 aaPredicted RBP16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 C8orf89P0DMQ9 161 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 CD1DP15813 335 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 SCTRP47872 440 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 UQCRFS1P47985 274 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 HNMTP50135 292 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 RAB10P61026 200 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 ILF2Q12905 390 aaKnown RBP16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 OR4D1Q15615 310 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 ZKSCAN8Q15776 578 aaPredicted RBP16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 DEFB134Q4QY38 66 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 UBAP2Q5T6F2 1119 aaKnown RBP16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 NDUFAF7Q7L592 441 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 GPSM1Q86YR5 675 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 NOA1Q8NC60 698 aaKnown RBP16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 PEX11GQ96HA9 241 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 CNDP1Q96KN2 507 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 AIF1LQ9BQI0 150 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 VN1R1Q9GZP7 353 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 PELI2Q9HAT8 420 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 ZDHHC18Q9NUE0 388 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 VPS4AQ9UN37 437 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 B3GNT3Q9Y2A9 372 aa16.82■□□□□ 0.28
CTDNEP1-207ENST00000572043 IGHV1-45A0A0A0MS14 117 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 DNAJB6O75190 326 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 UQCRHP07919 91 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 GNLYP22749 145 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 HSPA7P48741 367 aa16.81■□□□□ 0.28
CTDNEP1-207ENST00000572043 RGS1Q08116 209 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms