RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 ZBTB20Q9HC78 741 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-209ENST00000567635 ZNF160Q9HCG1 818 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 ANKHQ9HCJ1 492 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 LUZP4Q9P127 313 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 MAP10Q9P2G4 905 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 TXNDC16Q9P2K2 825 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 CTNNAL1Q9UBT7 734 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 MKL2Q9ULH7 1088 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 SH2B3Q9UQQ2 575 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 MTO1Q9Y2Z2 717 aaKnown RBP6.56□□□□□ -1.36
SF3B3-209ENST00000567635 MRPS2Q9Y399 296 aaKnown RBP6.56□□□□□ -1.36
SF3B3-209ENST00000567635 UNC79Q9P2D8 2635 aa6.56□□□□□ -1.36
SF3B3-209ENST00000567635 EML6Q6ZMW3 1958 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 NSG1A0A0A6YYJ2 146 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 TRBC2A0A5B9 178 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 CLEC18AA5D8T8 446 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 CXorf49A8MYA2 514 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-209ENST00000567635 CDC7O00311 574 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 BMP10O95393 424 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 NSA2O95478 260 aaKnown RBP6.55□□□□□ -1.36
SF3B3-209ENST00000567635 PRR35P0CG20 571 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 ICAM2P13598 275 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 ZNF37AP17032 561 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-209ENST00000567635 GLRBP48167 497 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 HNMTP50135 292 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 PLTPP55058 493 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 SNRPNP63162 240 aaKnown RBP6.55□□□□□ -1.36
SF3B3-209ENST00000567635 CDKL1Q00532 357 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 MEF2AQ02078 507 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-209ENST00000567635 C2orf54Q08AI8 447 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 PWP1Q13610 501 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 SYT16Q17RD7 645 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 CATSPEREQ5SY80 951 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 TMEM214Q6NUQ4 689 aaKnown RBP6.55□□□□□ -1.36
SF3B3-209ENST00000567635 TMEM205Q6UW68 189 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 SBSNQ6UWP8 590 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 IGFL2Q6UWQ7 119 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 CLEC18BQ6UXF7 455 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 ISLR2Q6UXK2 745 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 Q6ZS92 163 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 CAPN12Q6ZSI9 719 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 ASPGQ86U10 573 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 THOC6Q86W42 341 aaKnown RBP6.55□□□□□ -1.36
SF3B3-209ENST00000567635 CEP97Q8IW35 865 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 ZC3H7AQ8IWR0 971 aaKnown RBP6.55□□□□□ -1.36
SF3B3-209ENST00000567635 FAM26EQ8N5C1 309 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 CISD2Q8N5K1 135 aaKnown RBP6.55□□□□□ -1.36
SF3B3-209ENST00000567635 CLEC18CQ8NCF0 446 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 OR51Q1Q8NH59 317 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 DNAJB14Q8TBM8 379 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 ANKRD49Q8WVL7 239 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 METTL21AQ8WXB1 218 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 CDKL2Q92772 493 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 NEIL2Q969S2 332 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 C8orf44Q96CB5 159 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 SNRNP40Q96DI7 357 aaKnown RBP6.55□□□□□ -1.36
SF3B3-209ENST00000567635 C19orf60Q96EN9 201 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 TSPAN17Q96FV3 270 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 OR4K3Q96R72 315 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 CYTH2Q99418 400 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 MESP1Q9BRJ9 268 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 MCMBPQ9BTE3 642 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 SARGQ9BW04 601 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 ILKAPQ9H0C8 392 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-209ENST00000567635 ZNF700Q9H0M5 742 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 RAB17Q9H0T7 212 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 TSPYL1Q9H0U9 437 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 POPDC3Q9HBV1 291 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 GPAMQ9HCL2 828 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 SMYD2Q9NRG4 433 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 GRHL1Q9NZI5 618 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 IKZF3Q9UKT9 509 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 DYRK1BQ9Y463 629 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 OARD1Q9Y530 152 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 COPG1Q9Y678 874 aaKnown RBP6.55□□□□□ -1.36
SF3B3-209ENST00000567635 SLC22A7Q9Y694 548 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 KCNE2Q9Y6J6 123 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 BSNQ9UPA5 3926 aa6.55□□□□□ -1.36
SF3B3-209ENST00000567635 LOC102723996A0A087X1L8 192 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 IGHV1-45A0A0A0MS14 117 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 A0A1W2PQ72 361 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 NPEPPSL1A6NEC2 478 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 FAM159BA6NKW6 160 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 TCP11X1B4DZS4 312 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 SGK494L7N484 410 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 H2AFYO75367 372 aaKnown RBP6.54□□□□□ -1.36
SF3B3-209ENST00000567635 JRKO75564 520 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 PIAS1O75925 651 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 WFS1O76024 890 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 KLHL18O94889 574 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 SERPINA7P05543 415 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 SERPIND1P05546 499 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 CYC1P08574 325 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 SLC35G6P0C7Q6 338 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 CCDC166P0CW27 439 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 C8orf89P0DMQ9 161 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 COX6A1P12074 109 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 STMN1P16949 149 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 IL1RNP18510 177 aa6.54□□□□□ -1.36
SF3B3-209ENST00000567635 IL10P22301 178 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms