RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 SLC22A14Q9Y267 594 aa17■□□□□ 0.31
UPF3A-203ENST00000474056 H0YIG0 161 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 SGK494L7N484 410 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 OR1F1O43749 312 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 JRKO75564 520 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 HPP00738 406 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 ALPPP05187 535 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 HEXBP07686 556 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 SLC35G6P0C7Q6 338 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 COX6A1P12074 109 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 GMPRP36959 345 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 EEF1A2Q05639 463 aaKnown RBP16.99■□□□□ 0.31
UPF3A-203ENST00000474056 CSHL1Q14406 222 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 EFTUD2Q15029 972 aaKnown RBP eCLIP16.99■□□□□ 0.312e-6■■■□□ 15.3
UPF3A-203ENST00000474056 TMPRSS11BQ86T26 416 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 PDSS2Q86YH6 399 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 PPM1NQ8N819 430 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 FBF1Q8TES7 1133 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 ZNF592Q92610 1267 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 PNPLA2Q96AD5 504 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 RHBDF1Q96CC6 855 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 MOCOSQ96EN8 888 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 TSPAN17Q96FV3 270 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 VPS50Q96JG6 964 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 PELI2Q9HAT8 420 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 ZNF160Q9HCG1 818 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 HCN3Q9P1Z3 774 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 DYRK1BQ9Y463 629 aa16.99■□□□□ 0.31
UPF3A-203ENST00000474056 TRBC2A0A5B9 178 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 NCF1BA6NI72 391 aaPredicted RBP16.98■□□□□ 0.31
UPF3A-203ENST00000474056 NCF1CA8MVU1 366 aaPredicted RBP16.98■□□□□ 0.31
UPF3A-203ENST00000474056 NDUFS4O43181 175 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 KLHL41O60662 606 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 RDH16O75452 317 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 IPO13O94829 963 aaKnown RBP16.98■□□□□ 0.31
UPF3A-203ENST00000474056 BMP10O95393 424 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 CCDC166P0CW27 439 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 NCF1P14598 390 aaPredicted RBP16.98■□□□□ 0.31
UPF3A-203ENST00000474056 CD1DP15813 335 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 STMN1P16949 149 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 STX2P32856 288 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 SPRP35270 261 aaPredicted RBP16.98■□□□□ 0.31
UPF3A-203ENST00000474056 REEP5Q00765 189 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 TGFBIQ15582 683 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 ZKSCAN8Q15776 578 aaPredicted RBP16.98■□□□□ 0.31
UPF3A-203ENST00000474056 WHAMMP3Q1A5X7 153 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 PRR30Q53SZ7 412 aaPredicted RBP16.98■□□□□ 0.31
UPF3A-203ENST00000474056 IGFL3Q6UXB1 125 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 OR51Q1Q8NH59 317 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 THOC3Q96J01 351 aaKnown RBP16.98■□□□□ 0.31
UPF3A-203ENST00000474056 FAM129AQ9BZQ8 928 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 LHPPQ9H008 270 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 ANKHQ9HCJ1 492 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 SLAMF7Q9NQ25 335 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 ZDHHC18Q9NUE0 388 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 MKL2Q9ULH7 1088 aa16.98■□□□□ 0.31
UPF3A-203ENST00000474056 CTAGE15A4D2H0 777 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 WDR47O94967 919 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 SERPIND1P05546 499 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 CXCR2P25025 360 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 GDF5P43026 501 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 XCR1P46094 333 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 SCTRP47872 440 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 SLC6A12P48065 614 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 HNMTP50135 292 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 RAB10P61026 200 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 GUCY2DQ02846 1103 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 OR4D1Q15615 310 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 GRTP1Q5TC63 336 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 NXPE4Q6UWF7 544 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 CMC1Q7Z7K0 106 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 CTAGE6Q86UF2 777 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 AMER2Q8N7J2 671 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 ANKRD53Q8N9V6 530 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 TMEM79Q9BSE2 394 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 VN1R1Q9GZP7 353 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 ZFP69BQ9UJL9 534 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 NAALAD2Q9Y3Q0 740 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 CSAG2Q9Y5P2 127 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 SLC22A7Q9Y694 548 aa16.97■□□□□ 0.31
UPF3A-203ENST00000474056 IGHV1-45A0A0A0MS14 117 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 NSG1A0A0A6YYJ2 146 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 A0A1W2PQ72 361 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 ZNF860A6NHJ4 632 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 KLHL18O94889 574 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 B3GALT4O96024 378 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 VARSP26640 1264 aaKnown RBP16.96■□□□□ 0.31
UPF3A-203ENST00000474056 PWP1Q13610 501 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 SLMAPQ14BN4 828 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 PCOLCEQ15113 449 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 INPP5JQ15735 1006 aaPredicted RBP16.96■□□□□ 0.31
UPF3A-203ENST00000474056 PLEKHN1Q494U1 663 aaPredicted RBP16.96■□□□□ 0.31
UPF3A-203ENST00000474056 FBXO48Q5FWF7 155 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 UBAP2Q5T6F2 1119 aaKnown RBP16.96■□□□□ 0.31
UPF3A-203ENST00000474056 MFSD4BQ5TF39 518 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 AGAP7PQ5VUJ5 663 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 IRAK1BP1Q5VVH5 260 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 TMEM205Q6UW68 189 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 NDUFAF7Q7L592 441 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 KLHDC8AQ8IYD2 350 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms