RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PVALBP20472 110 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-201ENST00000225964 SMSP52788 366 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 PLP2Q04941 152 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 OR56A1Q8NGH5 318 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 SLC7A6OSQ96CW6 309 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-201ENST00000225964 CDKN2AIPNLQ96HQ2 116 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 P2RY13Q9BPV8 354 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 RNF39Q9H2S5 420 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 ST6GALNAC4Q9H4F1 302 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 GRHL1Q9NZI5 618 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 ROBO1Q9Y6N7 1651 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 TRBC2A0A5B9 178 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 METTL21EPA6NDL7 271 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 C2orf74A8MZ97 194 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 CLPXO76031 633 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 SRPRAP08240 638 aaKnown RBP12.85□□□□□ -0.35
COL1A1-201ENST00000225964 ANKRD26P1Q6NSI1 321 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 ASB18Q6ZVZ8 466 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 CTU1Q7Z7A3 348 aaKnown RBP12.85□□□□□ -0.35
COL1A1-201ENST00000225964 ZNF554Q86TJ5 538 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 GATSQ8NAP1 163 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 DMRTB1Q96MA1 342 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 IL4I1Q96RQ9 567 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 PRTFDC1Q9NRG1 225 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 SLIT3O75094 1523 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 SIX3O95343 332 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-201ENST00000225964 GKP32189 559 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 DSC3Q14574 896 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 BOLLQ8N9W6 283 aaKnown RBP12.85□□□□□ -0.35
COL1A1-201ENST00000225964 OR4C15Q8NGM1 316 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 OR10Q1Q8NGQ4 319 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 TCEAL3Q969E4 200 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 TGM7Q96PF1 710 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 STRA6Q9BX79 667 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 TOR3AQ9H497 397 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 MYOCOSA0A1B0GUC4 107 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 LOC730098B7Z3J9 87 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 TOR1BO14657 336 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 VNN2O95498 520 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 ZNF267Q14586 743 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-201ENST00000225964 OLFML1Q6UWY5 402 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 C7orf57Q8NEG2 295 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 TMEM203Q969S6 136 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 TTTY10Q9BZA0 68 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 ASB6Q9NWX5 421 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 AASSQ9UDR5 926 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 BAIAP2Q9UQB8 552 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 SPEF1Q9Y4P9 236 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 C2orf92A0A1B0GVN3 265 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 HERV-K104P61576 105 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 OR9A1PQ8NGU1 263 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 PIGVQ9NUD9 493 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 HRASLS2Q9NWW9 162 aa12.85□□□□□ -0.35
COL1A1-201ENST00000225964 DNMT3AQ9Y6K1 912 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-201ENST00000225964 HTR1AP08908 422 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 TMEM225Q6GV28 225 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 OR2L2Q8NH16 312 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 RDH8Q9NYR8 311 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 MED11Q9P086 117 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 SLC2A6Q9UGQ3 507 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 GLOD5A6NK44 160 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 C11orf98E9PRG8 122 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 PEX2P28328 305 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 MFSD5Q6N075 450 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 KCTD7Q96MP8 289 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 ZNF285Q96NJ3 590 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 LRRC3Q9BY71 257 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 KAT8Q9H7Z6 458 aaKnown RBP12.84□□□□□ -0.35
COL1A1-201ENST00000225964 ETAA1Q9NY74 926 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 RNF225M0QZC1 329 aaPredicted RBP12.84□□□□□ -0.35
COL1A1-201ENST00000225964 GSTM3P21266 225 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 PREPP48147 710 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 MS4A13Q5J8X5 152 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 MND1Q9BWT6 205 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 AKTIPQ9H8T0 292 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 NOCTQ9UK39 431 aaKnown RBP12.84□□□□□ -0.35
COL1A1-201ENST00000225964 SLC45A1Q9Y2W3 748 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 SLC35F4A4IF30 521 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 ENTPD6O75354 484 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 C6orf47O95873 294 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 OR2B6P58173 313 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 TPRG1Q6ZUI0 275 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 AQP11Q8NBQ7 271 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 NTAN1Q96AB6 310 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 PLD2O14939 933 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 VEGFDO43915 354 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 ANXA8P13928 327 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 PTGIRP43119 386 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 MAGEA12P43365 314 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 LY6G5CQ5SRR4 150 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 ZNF648Q5T619 568 aaPredicted RBP12.84□□□□□ -0.35
COL1A1-201ENST00000225964 PAQR7Q86WK9 346 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 GALNT11Q8NCW6 608 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 FANK1Q8TC84 345 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 FCGR1BQ92637 280 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 FBXL18Q96ME1 805 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 CD180Q99467 661 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 GPR174Q9BXC1 333 aa12.84□□□□□ -0.35
COL1A1-201ENST00000225964 OR51B5Q9H339 312 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms