RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 HECW1Q76N89 1606 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 MADDQ8WXG6 1647 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 GOLGB1Q14789 3259 aaKnown RBP1.54□□□□□ -2.16
SMG1-212ENST00000566328 RIMS1Q86UR5 1692 aaKnown RBP1.54□□□□□ -2.16
SMG1-212ENST00000566328 CDC42BPBQ9Y5S2 1711 aa1.54□□□□□ -2.16
SMG1-212ENST00000566328 IGHV3-16A0A0C4DH30 117 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 RSPH10B2B2RC85 870 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 F8VVB4 439 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 F8VWA3 439 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 VILLO15195 856 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 IGHV2-70P01814 119 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 RSPH10BP0C881 870 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 ZNF853P0CG23 659 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 LAMP2P13473 410 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 EDNRAP25101 427 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 GIFP27352 417 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 MATKP42679 507 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 CCR3P51677 355 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 MFAP4P55083 255 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 KRTAP10-10P60014 251 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 ADAMTSL3P82987 1691 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 MAMLD1Q13495 774 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 ALDH1L2Q3SY69 923 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 TIMM50Q3ZCQ8 353 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 FRMPD1Q5SYB0 1578 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 CEP162Q5TB80 1403 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 FMN1Q68DA7 1419 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 ZNF530Q6P9A1 599 aaPredicted RBP1.53□□□□□ -2.16
SMG1-212ENST00000566328 SUPT6HQ7KZ85 1726 aaKnown RBP1.53□□□□□ -2.16
SMG1-212ENST00000566328 STRCQ7RTU9 1775 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 TMPRSS11BQ86T26 416 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 CEP57Q86XR8 500 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 ABCA9Q8IUA7 1624 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 PLEKHH2Q8IVE3 1493 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 OR4K1Q8NGD4 311 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 KIAA1524Q8TCG1 905 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 ITLN1Q8WWA0 313 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 SYN2Q92777 582 aaPredicted RBP1.53□□□□□ -2.16
SMG1-212ENST00000566328 NEO1Q92859 1461 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 SLAMF9Q96A28 289 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 SLC22A18Q96BI1 424 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 SAT2Q96F10 170 aaPredicted RBP1.53□□□□□ -2.16
SMG1-212ENST00000566328 C7orf26Q96N11 449 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 EBF4Q9BQW3 602 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 STRADBQ9C0K7 418 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 MOB1AQ9H8S9 216 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 Q9N2K0 584 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 KCNMB3Q9NPA1 279 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 TMEM98Q9Y2Y6 226 aa1.53□□□□□ -2.16
SMG1-212ENST00000566328 RALGAPA1Q6GYQ0 2036 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 ARID2Q68CP9 1835 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 BCORL1Q5H9F3 1711 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 RICTORQ6R327 1708 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 CFAP43Q8NDM7 1665 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 EP400Q96L91 3159 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 MBD5Q9P267 1494 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 PTPRKQ15262 1439 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 DHX29Q7Z478 1369 aaKnown RBP1.52□□□□□ -2.17
SMG1-212ENST00000566328 TMEM221A6NGB7 291 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 RPL37AP8A6NKH3 93 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 C2CD4DB7Z1M9 353 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 SLC33A1O00400 549 aaPredicted RBP1.52□□□□□ -2.17
SMG1-212ENST00000566328 UMPSP11172 480 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 IRF2P14316 349 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 CHMP24386 653 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 GPR183P32249 361 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 CHRNA3P32297 505 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 VAMP7P51809 220 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 AIMP2Q13155 320 aaKnown RBP1.52□□□□□ -2.17
SMG1-212ENST00000566328 GPR33Q49SQ1 333 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 ZNF506Q5JVG8 444 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 OR4A47Q6IF82 309 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 EMBQ6PCB8 327 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 ZCCHC12Q6PEW1 402 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 IGFL2Q6UWQ7 119 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 PAMR1Q6UXH9 720 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 SLC24A5Q71RS6 500 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 LRRC49Q8IUZ0 686 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 WDTC1Q8N5D0 677 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 NOA1Q8NC60 698 aaKnown RBP1.52□□□□□ -2.17
SMG1-212ENST00000566328 PIK3R3Q92569 461 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 TAAR6Q96RI8 345 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 CDCA3Q99618 268 aaPredicted RBP1.52□□□□□ -2.17
SMG1-212ENST00000566328 CCDC3Q9BQI4 270 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 OSGEPL1Q9H4B0 414 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 IRAK4Q9NWZ3 460 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 ARHGEF38Q9NXL2 777 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 SAGE1Q9NXZ1 904 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 PSD3Q9NYI0 1048 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 SEC63Q9UGP8 760 aaKnown RBP1.52□□□□□ -2.17
SMG1-212ENST00000566328 PLAGL1Q9UM63 463 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 PADI2Q9Y2J8 665 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 KIDINS220Q9ULH0 1771 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 CDC42BPAQ5VT25 1732 aa1.52□□□□□ -2.17
SMG1-212ENST00000566328 PCF11O94913 1555 aaKnown RBP1.51□□□□□ -2.17
SMG1-212ENST00000566328 SAMD9LQ8IVG5 1584 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 ZFYVE16Q7Z3T8 1539 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 SYCP2Q9BX26 1530 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 A2MP01023 1474 aa1.51□□□□□ -2.17
SMG1-212ENST00000566328 NCOA2Q15596 1464 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms