RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 SLBPQ14493 270 aaKnown RBP eCLIP9.83□□□□□ -0.84
LRRC28-221ENST00000561276 RTP5Q14D33 572 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 RBBP7Q16576 425 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 HIST2H2ACQ16777 129 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-221ENST00000561276 CFAP157Q5JU67 520 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 WASHC2DQ5SRD0 308 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 TMEM164Q5U3C3 297 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 HIST2H2AA3Q6FI13 130 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 CEACAM20Q6UY09 585 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 RNF44Q7L0R7 432 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 ERMP1Q7Z2K6 904 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 PPP1R3BQ86XI6 285 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 MYLK4Q86YV6 388 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-221ENST00000561276 GPR135Q8IZ08 494 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 LSMEM2Q8N112 164 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 KRT78Q8N1N4 520 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 TBC1D19Q8N5T2 526 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 ANKRD53Q8N9V6 530 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 MFSD9Q8NBP5 474 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 OR4F6Q8NGB9 312 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 OR8K5Q8NH50 307 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 SREK1Q8WXA9 508 aaKnown RBP9.83□□□□□ -0.84
LRRC28-221ENST00000561276 PMEPA1Q969W9 287 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 RERGQ96A58 199 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-221ENST00000561276 TM4SF19Q96DZ7 209 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 THAP11Q96EK4 314 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 CNDP1Q96KN2 507 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 CDK15Q96Q40 435 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 EFCAB11Q9BUY7 163 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 GSTO2Q9H4Y5 243 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 NT5DC2Q9H857 520 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 FANCEQ9HB96 536 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 STARD5Q9NSY2 213 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 NKIRAS1Q9NYS0 192 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 RNF11Q9Y3C5 154 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 PCDHGA4Q9Y5G9 962 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 B3GALT1Q9Y5Z6 326 aa9.83□□□□□ -0.84
LRRC28-221ENST00000561276 MED19A0JLT2 244 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-221ENST00000561276 ANKDD1BA6NHY2 528 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 C9orf172C9J069 976 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 UBFD1O14562 309 aaKnown RBP9.82□□□□□ -0.84
LRRC28-221ENST00000561276 NVLO15381 856 aaKnown RBP9.82□□□□□ -0.84
LRRC28-221ENST00000561276 UGDHO60701 494 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 OR4F21O95013 312 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 MLYCDO95822 493 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 NTRK1P04629 796 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 NEFHP12036 1026 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 SLC5A2P31639 672 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 AHRP35869 848 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 BCL6P41182 706 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 CCR10P46092 362 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 SCTRP47872 440 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 ITGA1P56199 1179 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 RAB15P59190 212 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 PPP2R2AP63151 447 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 REEP5Q00765 189 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 TRAF3Q13114 568 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 CPSF6Q16630 551 aaKnown RBP eCLIP9.82□□□□□ -0.84
LRRC28-221ENST00000561276 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.82□□□□□ -0.84
LRRC28-221ENST00000561276 HSP90B2PQ58FF3 399 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 PAGE2BQ5JRK9 111 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 TCTE1Q5JU00 501 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 PRAMEF17Q5VTA0 474 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 PWWP2BQ6NUJ5 590 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 MED27Q6P2C8 311 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 TLDC1Q6P9B6 456 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 ZCCHC23Q6ZST2 131 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 FRMD7Q6ZUT3 714 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 TMEM126BQ8IUX1 230 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 L3MBTL4Q8NA19 623 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 MDM1Q8TC05 714 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 MGARPQ8TDB4 240 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 SLC13A3Q8WWT9 602 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 RNF31Q96EP0 1072 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 ZNF285Q96NJ3 590 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 TEFMQ96QE5 360 aaKnown RBP9.82□□□□□ -0.84
LRRC28-221ENST00000561276 MACROD1Q9BQ69 325 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 ZPBPQ9BS86 351 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 DDA1Q9BW61 102 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 PITHD1Q9GZP4 211 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-221ENST00000561276 IRAK4Q9NWZ3 460 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 ZFP69BQ9UJL9 534 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 ZNF225Q9UK10 706 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 PCDHGA3Q9Y5H0 932 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 PCDHGA11Q9Y5H2 935 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 AP1M2Q9Y6Q5 423 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 SCN3AQ9NY46 2000 aa9.82□□□□□ -0.84
LRRC28-221ENST00000561276 HYKKA2RU49 373 aa9.81□□□□□ -0.84
LRRC28-221ENST00000561276 CDRT15L2A8MXV6 281 aa9.81□□□□□ -0.84
LRRC28-221ENST00000561276 H0YIV9 168 aa9.81□□□□□ -0.84
LRRC28-221ENST00000561276 TXNDC9O14530 226 aa9.81□□□□□ -0.84
LRRC28-221ENST00000561276 ZNF749O43361 778 aa9.81□□□□□ -0.84
LRRC28-221ENST00000561276 BRINP1O60477 761 aa9.81□□□□□ -0.84
LRRC28-221ENST00000561276 NPHS1O60500 1241 aa9.81□□□□□ -0.84
LRRC28-221ENST00000561276 SCRG1O75711 98 aa9.81□□□□□ -0.84
LRRC28-221ENST00000561276 DXOO77932 396 aaKnown RBP9.81□□□□□ -0.84
LRRC28-221ENST00000561276 TIAF1O95411 115 aa9.81□□□□□ -0.84
LRRC28-221ENST00000561276 STATHP02808 62 aa9.81□□□□□ -0.84
LRRC28-221ENST00000561276 SERPIND1P05546 499 aa9.81□□□□□ -0.84
LRRC28-221ENST00000561276 PKNOX1P55347 436 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms