RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 SGK494L7N484 410 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 SEMA7AO75326 666 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 RDH16O75452 317 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 F10P00742 488 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 SERPIND1P05546 499 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 HIST1H2AGP0C0S8 130 aaPredicted RBP9.93□□□□□ -0.82
CPSF4-212ENST00000482251 HIST1H2ADP20671 130 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 SLC26A3P40879 764 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 AVPR1BP47901 424 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 SOX8P57073 446 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 NDUFA9Q16795 377 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 ZXDCQ2QGD7 858 aaPredicted RBP9.93□□□□□ -0.82
CPSF4-212ENST00000482251 EIF2S3LQ2VIR3 472 aaKnown RBP9.93□□□□□ -0.82
CPSF4-212ENST00000482251 MINDY4Q4G0A6 757 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 FHL5Q5TD97 284 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 AGAP7PQ5VUJ5 663 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 GARNL3Q5VVW2 1013 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 CAPN13Q6MZZ7 669 aaPredicted RBP9.93□□□□□ -0.82
CPSF4-212ENST00000482251 TMEM207Q6UWW9 146 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 Q6ZS92 163 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 LANCL3Q6ZV70 420 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 STRA8Q7Z7C7 330 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 ASPGQ86U10 573 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 ZBED8Q8IZ13 594 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 KCT2Q8NC54 265 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 PRR7Q8TB68 274 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 BRIX1Q8TDN6 353 aaKnown RBP9.93□□□□□ -0.82
CPSF4-212ENST00000482251 MVB12AQ96EY5 273 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 HIST1H2AHQ96KK5 128 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 AGAP4Q96P64 663 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 HIST1H2AJQ99878 128 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 H2AFJQ9BTM1 129 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 SGPP1Q9BX95 441 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 SLC29A3Q9BZD2 475 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 EPS8L2Q9H6S3 715 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 MKKSQ9NPJ1 570 aaPredicted RBP9.93□□□□□ -0.82
CPSF4-212ENST00000482251 TMEM184CQ9NVA4 438 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 PTGFRNQ9P2B2 879 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 MKL2Q9ULH7 1088 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 NTNG1Q9Y2I2 539 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 PCDHGA10Q9Y5H3 936 aa9.93□□□□□ -0.82
CPSF4-212ENST00000482251 IGHV1-45A0A0A0MS14 117 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 OR2W5A6NFC9 320 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 CDC7O00311 574 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 TXNDC9O14530 226 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 SLC16A5O15375 505 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 NDUFS4O43181 175 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 LCMT2O60294 686 aaKnown RBP9.92□□□□□ -0.82
CPSF4-212ENST00000482251 KLHL41O60662 606 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 CDC123O75794 336 aaPredicted RBP9.92□□□□□ -0.82
CPSF4-212ENST00000482251 KLHL18O94889 574 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 B3GALT4O96024 378 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 PRR35P0CG20 571 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 ZNF37AP17032 561 aaPredicted RBP9.92□□□□□ -0.82
CPSF4-212ENST00000482251 CXCR2P25025 360 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 XCR1P46094 333 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 EMP3P54852 163 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 MGAT5Q09328 741 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 CATSPEREQ5SY80 951 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 ATG9BQ674R7 924 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 B3GNTL1Q67FW5 361 aaPredicted RBP9.92□□□□□ -0.82
CPSF4-212ENST00000482251 HIST2H2BCQ6DN03 193 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 TMEM214Q6NUQ4 689 aaKnown RBP9.92□□□□□ -0.82
CPSF4-212ENST00000482251 LCTLQ6UWM7 567 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 SBSNQ6UWP8 590 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 IGFL3Q6UXB1 125 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 GALNT7Q86SF2 657 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 SLC26A11Q86WA9 606 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 ZC3HC1Q86WB0 502 aaKnown RBP9.92□□□□□ -0.82
CPSF4-212ENST00000482251 PDSS2Q86YH6 399 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 KBTBD2Q8IY47 623 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 DNAJB14Q8TBM8 379 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 PPP4R1Q8TF05 950 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 NACC2Q96BF6 587 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 LRRC39Q96DD0 335 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 MOCOSQ96EN8 888 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 VPS50Q96JG6 964 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 MAGEB10Q96LZ2 347 aaPredicted RBP9.92□□□□□ -0.82
CPSF4-212ENST00000482251 OR4K3Q96R72 315 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 VN1R1Q9GZP7 353 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 PCBD2Q9H0N5 130 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 SPNS1Q9H2V7 528 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 SMYD2Q9NRG4 433 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 CORO1CQ9ULV4 474 aaPredicted RBP9.92□□□□□ -0.82
CPSF4-212ENST00000482251 VWA7Q9Y334 891 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 LRRK2Q5S007 2527 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 SCN3AQ9NY46 2000 aa9.92□□□□□ -0.82
CPSF4-212ENST00000482251 A1L4Q6 167 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 CTAGE15A4D2H0 777 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 NCF1BA6NI72 391 aaPredicted RBP9.91□□□□□ -0.82
CPSF4-212ENST00000482251 NCF1CA8MVU1 366 aaPredicted RBP9.91□□□□□ -0.82
CPSF4-212ENST00000482251 RAD51CO43502 376 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 OR1F1O43749 312 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 SEC24DO94855 1032 aaPredicted RBP9.91□□□□□ -0.82
CPSF4-212ENST00000482251 BMP10O95393 424 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 NSA2O95478 260 aaKnown RBP9.91□□□□□ -0.82
CPSF4-212ENST00000482251 SLC35G6P0C7Q6 338 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 C8orf89P0DMQ9 161 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 ITGAMP11215 1152 aa9.91□□□□□ -0.82
CPSF4-212ENST00000482251 NCF1P14598 390 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms