RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 DESI1Q6ICB0 168 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 TMEM214Q6NUQ4 689 aaKnown RBP8.7□□□□□ -1.02
SMC1A-203ENST00000428014 FAM199XQ6PEV8 388 aaPredicted RBP8.7□□□□□ -1.02
SMC1A-203ENST00000428014 SUSD1Q6UWL2 747 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 RIPOR1Q6ZS17 1223 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 TTLL10Q6ZVT0 673 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 TRMT10CQ7L0Y3 403 aaKnown RBP8.7□□□□□ -1.02
SMC1A-203ENST00000428014 TAOK1Q7L7X3 1001 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 MRGPREQ86SM8 312 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 CEP97Q8IW35 865 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 IFT20Q8IY31 132 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 C17orf53Q8N3J3 647 aaPredicted RBP8.7□□□□□ -1.02
SMC1A-203ENST00000428014 MFSD9Q8NBP5 474 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 NT5CQ8TCD5 201 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 UBTD2Q8WUN7 234 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 SLC44A1Q8WWI5 657 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 FAM136AQ96C01 138 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 CABS1Q96KC9 395 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 C10orf90Q96M02 699 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 AIF1LQ9BQI0 150 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 ING2Q9H160 280 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 PSD3Q9NYI0 1048 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 PLA2G2EQ9NZK7 142 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 DHCR7Q9UBM7 475 aaKnown RBP8.7□□□□□ -1.02
SMC1A-203ENST00000428014 DMGDHQ9UI17 866 aaKnown RBP8.7□□□□□ -1.02
SMC1A-203ENST00000428014 PTBP2Q9UKA9 531 aaKnown RBP8.7□□□□□ -1.02
SMC1A-203ENST00000428014 PPT2Q9UMR5 302 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 MTO1Q9Y2Z2 717 aaKnown RBP8.7□□□□□ -1.02
SMC1A-203ENST00000428014 ZNF451Q9Y4E5 1061 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 MED13Q9UHV7 2174 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 CNTRLQ7Z7A1 2325 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 BOD1L1Q8NFC6 3051 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 NUP210LQ5VU65 1888 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 LOC105369274A0A096LPK9 316 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 LOC102723532A0A0G2JNH3 316 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 A0A0J9YVX5 310 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 CXorf49A8MYA2 514 aaPredicted RBP8.69□□□□□ -1.02
SMC1A-203ENST00000428014 H7BY64 318 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 KLK8O60259 260 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 KERAO60938 352 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 KRT38O76015 456 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 ALPPP05187 535 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 FURINP09958 794 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 LTA4HP09960 611 aaKnown RBP8.69□□□□□ -1.02
SMC1A-203ENST00000428014 SLC35E2BP0CK96 405 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 ICAM2P13598 275 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 ECHS1P30084 290 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 CASRP41180 1078 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 TSFMP43897 325 aaKnown RBP8.69□□□□□ -1.02
SMC1A-203ENST00000428014 SCTRP47872 440 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 MMP16P51512 607 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 VSX2P58304 361 aaPredicted RBP8.69□□□□□ -1.02
SMC1A-203ENST00000428014 REEP5Q00765 189 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 KLRB1Q12918 225 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 LAPTM5Q13571 262 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 CSHL1Q14406 222 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 SLC9A5Q14940 896 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 ACAP2Q15057 778 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 FAM83EQ2M2I3 478 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 DEFB110Q30KQ9 67 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 DEFB109BQ30KR1 87 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 PTCHD3Q3KNS1 767 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 LACTB2Q53H82 288 aaPredicted RBP8.69□□□□□ -1.02
SMC1A-203ENST00000428014 DCAF10Q5QP82 559 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 HP1BP3Q5SSJ5 553 aaPredicted RBP8.69□□□□□ -1.02
SMC1A-203ENST00000428014 LGSNQ5TDP6 509 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 VWA5B1Q5TIE3 1220 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 PRAMEF17Q5VTA0 474 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 ATG9BQ674R7 924 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 FRMPD2BQ6IN97 320 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 IGFL2Q6UWQ7 119 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 ATG14Q6ZNE5 492 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 COX15Q7KZN9 410 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 LRRC70Q7Z2Q7 622 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 VN1R4Q7Z5H5 301 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 TBC1D1Q86TI0 1168 aaPredicted RBP8.69□□□□□ -1.02
SMC1A-203ENST00000428014 ISCA2Q86U28 154 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 OR4N4Q8N0Y3 316 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 CLEC1AQ8NC01 280 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 ADAMTS18Q8TE60 1221 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 FBF1Q8TES7 1133 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 ANKRD49Q8WVL7 239 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 SLC5A11Q8WWX8 675 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 TM9SF4Q92544 642 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 UBE2E3Q969T4 207 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 MTBPQ96DY7 904 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 PRAP1Q96NZ9 151 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 OR4K3Q96R72 315 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 EFCAB11Q9BUY7 163 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 ACAT2Q9BWD1 397 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 KLHL25Q9H0H3 589 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 NUDT4Q9NZJ9 180 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 ADGRE2Q9UHX3 823 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 TLK1Q9UKI8 766 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 RUVBL1Q9Y265 456 aaKnown RBP8.69□□□□□ -1.02
SMC1A-203ENST00000428014 ACOT9Q9Y305 439 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 MRPS18BQ9Y676 258 aaKnown RBP8.69□□□□□ -1.02
SMC1A-203ENST00000428014 MYO18BQ8IUG5 2567 aa8.69□□□□□ -1.02
SMC1A-203ENST00000428014 A0A087WUV0 522 aaPredicted RBP8.68□□□□□ -1.02
SMC1A-203ENST00000428014 A0A088AWK7 358 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms