RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 REEP5Q00765 189 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 OCRLQ01968 901 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 PRDX1Q06830 199 aaKnown RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 DDX39BQ13838 428 aaKnown RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 DOC2AQ14183 400 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 RBBP5Q15291 538 aaKnown RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 TBCCQ15814 346 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 PDCD2Q16342 344 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 CPSF6Q16630 551 aaKnown RBP eCLIP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 CLPPQ16740 277 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 IMPG1Q17R60 797 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 GGTA1PQ4G0N0 100 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 SNAP47Q5SQN1 464 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 PERM1Q5SV97 790 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 C10orf62Q5T681 223 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 NKAIN2Q5VXU1 208 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 LIPJQ5W064 366 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 ATG9BQ674R7 924 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 GRHL2Q6ISB3 625 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 LETMD1Q6P1Q0 360 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 MED27Q6P2C8 311 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 NXPE4Q6UWF7 544 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 FAM92BQ6ZTR7 304 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 CPLX4Q7Z7G2 160 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 SYVN1Q86TM6 617 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 TRIM73Q86UV7 250 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 LRRC56Q8IYG6 542 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 CARFQ8N187 725 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZNF655Q8N720 491 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZNF781Q8N8C0 355 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 TTLQ8NG68 377 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 OR2A1Q8NGT9 310 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 PIWIL2Q8TC59 973 aaKnown RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 METTL6Q8TCB7 284 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 NETO1Q8TDF5 533 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 RERGQ96A58 199 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 OR2A14Q96R47 310 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 OR4K3Q96R72 315 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 SIKE1Q9BRV8 207 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 CENPKQ9BS16 269 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 DPH7Q9BTV6 452 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 NTMT1Q9BV86 223 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 NLNQ9BYT8 704 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 PITHD1Q9GZP4 211 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 LRRN3Q9H3W5 708 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 FANCEQ9HB96 536 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZBTB26Q9HCK0 441 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 NPHS2Q9NP85 383 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 SLCO1B3Q9NPD5 702 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 RXFP3Q9NSD7 469 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 FGFR1OP2Q9NVK5 253 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 RIC8BQ9NVN3 520 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 CUEDC1Q9NWM3 386 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 AKAP7Q9P0M2 348 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 VTI1BQ9UEU0 232 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 EPHA6Q9UF33 1036 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 ADAM21Q9UKJ8 722 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 GPC6Q9Y625 555 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 THADAQ6YHU6 1953 aa6.33□□□□□ -1.4
CTDNEP1-204ENST00000570484 LY6G6EA0A0G2JKS1 128 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 A0A0G2JND7 137 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 TRBC2A0A5B9 178 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 GMNCA6NCL1 334 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 ANKDD1BA6NHY2 528 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 TMEM233B4DJY2 109 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 D6RAR5 112 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 H7BY64 318 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 HAT1O14929 419 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 HDAC3O15379 428 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 ITM2AO43736 263 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 OR1F1O43749 312 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 DIAPH2O60879 1101 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 ULK1O75385 1050 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZBTB11O95625 1053 aaPredicted RBP6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 SERPIND1P05546 499 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 CAPN1P07384 714 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 SLC35G6P0C7Q6 338 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 ACP1P24666 158 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 PRDX3P30048 256 aaKnown RBP6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 CSF2RBP32927 897 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 ACADVLP49748 655 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 RAP1GDS1P52306 607 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 PPP1CAP62136 330 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 CYP4F2P78329 520 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 MEF2AQ02078 507 aaPredicted RBP6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 RGS1Q08116 209 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 CYP4F3Q08477 520 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 ILKQ13418 452 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZRSR2Q15696 482 aaKnown RBP6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 SGO1Q5FBB7 561 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZC3H12BQ5HYM0 836 aaKnown RBP6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 CATSPEREQ5SY80 951 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 TMTC4Q5T4D3 741 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 PHF19Q5T6S3 580 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 CACHD1Q5VU97 1274 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 KANK2Q63ZY3 851 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 FRG2Q64ET8 278 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 CLEC6AQ6EIG7 209 aa6.32□□□□□ -1.4
CTDNEP1-204ENST00000570484 CYB5D1Q6P9G0 228 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms