RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CPZQ66K79 652 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 CCDC80Q76M96 950 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 ABI3BPQ7Z7G0 1075 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 LYSMD2Q8IV50 215 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 UMODL1-AS1Q8N2C9 162 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 CADM2Q8N3J6 435 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 ARMC5Q96C12 935 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 ADGRE3Q9BY15 652 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 NUFIP1Q9UHK0 495 aaKnown RBP14.2□□□□□ -0.14
HOXC11-202ENST00000546378 CLCA3PQ9Y6N3 262 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 SIP14410 1827 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 AREL1O15033 823 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 ADAM12O43184 909 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 TNFRSF21O75509 655 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 AP2A2O94973 939 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 CSRP3P50461 194 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 CHIT1Q13231 466 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.2□□□□□ -0.14
HOXC11-202ENST00000546378 B3GLCTQ6Y288 498 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 PRR23CQ6ZRP0 262 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 SLC5A8Q8N695 610 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 DPF3Q92784 378 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 SCAMP4Q969E2 229 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 DNMT3BQ9UBC3 853 aaKnown RBP14.2□□□□□ -0.14
HOXC11-202ENST00000546378 TEKT2Q9UIF3 430 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 ZNF236Q9UL36 1845 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 PIKFYVEQ9Y2I7 2098 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 PRUNE2Q8WUY3 3088 aa14.2□□□□□ -0.14
HOXC11-202ENST00000546378 LOC285095A0A1B0GVY8 99 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 C2orf78A6NCI8 922 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 NOTOA8MTQ0 251 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 TNFRSF11BO00300 401 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 SLC22A1O15245 554 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 TAPBPO15533 448 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 KIAA0513O60268 411 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 PRAMEF11O60813 436 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 CCDC159P0C7I6 412 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 ALPPL2P10696 532 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 ZNF7P17097 686 aaPredicted RBP14.19□□□□□ -0.14
HOXC11-202ENST00000546378 TYMPP19971 482 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 MC1RQ01726 317 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 LILRA3Q8N6C8 439 aaPredicted RBP14.19□□□□□ -0.14
HOXC11-202ENST00000546378 SETD9Q8NE22 299 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 OR9Q1Q8NGQ5 310 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 RHEBL1Q8TAI7 183 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 CDK5RAP1Q96SZ6 601 aaKnown RBP14.19□□□□□ -0.14
HOXC11-202ENST00000546378 AKIP1Q9NQ31 210 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 IL20RAQ9UHF4 553 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 TTC34A8MYJ7 566 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 MANBAO00462 879 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 EOMESO95936 686 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 KRT6AP02538 564 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 KRT6BP04259 564 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 ETFAP13804 333 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 KRT6CP48668 564 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 SLC11A1P49279 550 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 NPRL3Q12980 569 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 GPNMBQ14956 572 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 ZNF551Q7Z340 670 aaPredicted RBP14.19□□□□□ -0.14
HOXC11-202ENST00000546378 LIMS2Q7Z4I7 341 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 AMER2Q8N7J2 671 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 S100ZQ8WXG8 99 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 MTERF3Q96E29 417 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 MTG2Q9H4K7 406 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 DCAF13Q9NV06 445 aaKnown RBP14.19□□□□□ -0.14
HOXC11-202ENST00000546378 CXXC1Q9P0U4 656 aaPredicted RBP14.19□□□□□ -0.14
HOXC11-202ENST00000546378 ZNF221Q9UK13 617 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 PPT2Q9UMR5 302 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 MGAT4DA6NG13 374 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 TRBC1P01850 177 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 EPORP19235 508 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 XPAP23025 273 aaPredicted RBP14.19□□□□□ -0.14
HOXC11-202ENST00000546378 OR1D2P34982 312 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 PREPP48147 710 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 PRMT2P55345 433 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 GBX1Q14549 363 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 RSPO2Q6UXX9 243 aaPredicted RBP14.19□□□□□ -0.14
HOXC11-202ENST00000546378 SLC39A5Q6ZMH5 540 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 TAS1R1Q7RTX1 841 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 ADAMTSL2Q86TH1 951 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 PTRH1Q86Y79 214 aaKnown RBP14.19□□□□□ -0.14
HOXC11-202ENST00000546378 ZNF675Q8TD23 568 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 EID2BQ96D98 161 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 ARSGQ96EG1 525 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 NIPSNAP1Q9BPW8 284 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 ZFYVE1Q9HBF4 777 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 ZDHHC4Q9NPG8 344 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 TMEM248Q9NWD8 314 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 FZD4Q9ULV1 537 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 ERVK-11Q9UQG0 969 aa14.19□□□□□ -0.14
HOXC11-202ENST00000546378 PSIP1O75475 530 aaKnown RBP14.18□□□□□ -0.14
HOXC11-202ENST00000546378 PRLP01236 227 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 TGM1P22735 817 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 CD6P30203 668 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 SLC11A2P49281 568 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 ACSM2AQ08AH3 577 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 LRIT3Q3SXY7 679 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 TBRG1Q3YBR2 411 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 XKR7Q5GH72 579 aa14.18□□□□□ -0.14
HOXC11-202ENST00000546378 FAM26DQ5JW98 314 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms