RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 GAL3ST4Q96RP7 486 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 DCLK1O15075 740 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 RB1P06400 928 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 MLLT1Q03111 559 aaPredicted RBP14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 PRPF38BQ5VTL8 546 aaKnown RBP14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 MBOAT1Q6ZNC8 495 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 DNAJB8Q8NHS0 232 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 RDH8Q9NYR8 311 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 DNAJB13P59910 316 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 RPS13P62277 151 aaKnown RBP14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 CYBRD1Q53TN4 286 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 OGFRL1Q5TC84 451 aaPredicted RBP14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 HSDL2Q6YN16 418 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 FBXO15Q8NCQ5 510 aaPredicted RBP14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 KCTD13Q8WZ19 329 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 SMOQ99835 787 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 IL1RAPQ9NPH3 570 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 FARSBQ9NSD9 589 aaKnown RBP14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 C5orf51A6NDU8 294 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 C8orf89P0DMQ9 161 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 FPR1P21462 350 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 IDSP22304 550 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 ADAM15Q13444 863 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 CEACAM20Q6UY09 585 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 RNF130Q86XS8 419 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 SIAH1Q8IUQ4 282 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 TMEM199Q8N511 208 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 TMEM80Q96HE8 168 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 PHPT1Q9NRX4 125 aaPredicted RBP14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 OR2AT4A6NND4 320 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 LDB2O43679 373 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 CD72P21854 359 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 CDKN2DP55273 166 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 CBLBQ13191 982 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 MAB21L1Q13394 359 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 CCL14Q16627 93 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 ENPP6Q6UWR7 440 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 SYVN1Q86TM6 617 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 TP53INP2Q8IXH6 220 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 MSANTD3Q96H12 275 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 ZC3H10Q96K80 434 aaKnown RBP14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 B3GNT4Q9C0J1 378 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 TM9SF3Q9HD45 589 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 MRPS30Q9NP92 439 aaKnown RBP14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 ACADVLP49748 655 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 ARHGAP1Q07960 439 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 C9orf43Q8TAL5 461 aaPredicted RBP14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 FRMD6Q96NE9 622 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 MEAF6Q9HAF1 191 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 ZCCHC3Q9NUD5 404 aaKnown RBP14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 ZDHHC3Q9NYG2 299 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 CHD2O14647 1828 aaKnown RBP14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 A0A0D9SEW6 157 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 SYN3O14994 580 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 TEX28O15482 410 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 HCAR3P49019 387 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 CHERPQ8IWX8 916 aaKnown RBP14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 GDAP2Q9NXN4 497 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 CDK6Q00534 326 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 PTGR1Q14914 329 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 TCEAL1Q15170 157 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 MS4A13Q5J8X5 152 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 HMBOX1Q6NT76 420 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 CCDC28AQ8IWP9 274 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 TRIM43Q96BQ3 446 aaPredicted RBP14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 HAVCR1Q96D42 359 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 PAK1IP1Q9NWT1 392 aaPredicted RBP14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 ERVK13-1Q9NX77 482 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 TNFRSF10DQ9UBN6 386 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 PTBP2Q9UKA9 531 aaKnown RBP14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 CDC14AQ9UNH5 594 aa14.9□□□□□ -0.02
SHROOM4-201ENST00000289292 BEST1O76090 585 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 SLC6A4P31645 630 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 TUBA1BP68363 451 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 DPY19L1Q2PZI1 675 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 CDCA2Q69YH5 1023 aaPredicted RBP14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 TUBA1AQ71U36 451 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 AUTS2Q8WXX7 1259 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 LGR4Q9BXB1 951 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 TPT1P8Q9HAU6 139 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 GSTT2BP0CG30 244 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 SLC9A3P48764 834 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 STC1P52823 247 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 TMBIM6P55061 237 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 MEF2AQ02078 507 aaPredicted RBP14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 EFR3AQ14156 821 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 SCGB2B2Q4G0G5 96 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 TECRLQ5HYJ1 363 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 TOR1AIP1Q5JTV8 583 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 ZNF648Q5T619 568 aaPredicted RBP14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 SLC7A5P1Q8MH63 180 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 OR2L3Q8NG85 312 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 KIAA1191Q96A73 305 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 PCDHB3Q9Y5E6 796 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 PENKP01210 267 aaPredicted RBP14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 T-ENOLP0DO92 83 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 MVKQ03426 396 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 SP140Q13342 867 aa14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 PUM1Q14671 1186 aaKnown RBP eCLIP14.89□□□□□ -0.03
SHROOM4-201ENST00000289292 SLC15A4Q8N697 577 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms