RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CDKN2CP42773 168 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 OR2B6P58173 313 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TAF10Q12962 218 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 MED22Q15528 200 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TIGD6Q17RP2 521 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 XKR7Q5GH72 579 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 MS4A13Q5J8X5 152 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 ARMC12Q5T9G4 340 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 PPP2R2DQ66LE6 453 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF57Q68EA5 555 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 PDE12Q6L8Q7 609 aaKnown RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 MSANTD2Q6P1R3 559 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 CNKSR3Q6P9H4 555 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 FBXO46Q6PJ61 603 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 MSRB3Q8IXL7 192 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 CACTIN-AS1Q8N1I8 211 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 UXS1Q8NBZ7 420 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 DNASE1L2Q92874 299 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 OMA1Q96E52 524 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 RTP3Q9BQQ7 232 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 CENPOQ9BU64 300 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 FAM126AQ9BYI3 521 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 HDHD2Q9H0R4 259 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 IGFLR1Q9H665 355 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 PAQR5Q9NXK6 330 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 AGO1Q9UL18 857 aaKnown RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 SBF1O95248 1867 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 VCANP13611 3396 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 DYTNA2CJ06 578 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 MBLAC1A4D2B0 266 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 FAM220BPB1ANY3 271 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 LOC110117498-PIK3R3F6TDL0 507 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 STSP08842 583 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 HOXD8P13378 290 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 GRK5P34947 590 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 FEN1P39748 380 aaKnown RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 SLC26A3P40879 764 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 CENPAP49450 140 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 VLDLRP98155 873 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 MXD1Q05195 221 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 BCL2L1Q07817 233 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 SLC14A1Q13336 389 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 PLPP4Q5VZY2 271 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 CPZQ66K79 652 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 ERAP2Q6P179 960 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 SUSD1Q6UWL2 747 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TRIM48Q8IWZ4 208 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 FAM9CQ8IZT9 166 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 SVOPLQ8N434 492 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TTC9BQ8N6N2 239 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 KLHDC9Q8NEP7 349 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 MDGA1Q8NFP4 955 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 PYURFQ96I23 114 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TMEM246Q9BRR3 403 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 EBPLQ9BY08 206 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 SLC28A3Q9HAS3 691 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 DCAF13Q9NV06 445 aaKnown RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 GPR83Q9NYM4 423 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 OGDHLQ9ULD0 1010 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 GTF2A1LQ9UNN4 478 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 RNF6Q9Y252 685 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TESMINQ9Y4I5 508 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 ABHD14A-ACY1A0A1B0GW23 586 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 AGAP5A6NIR3 686 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 WISP3O95389 354 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 OPN1SWP03999 348 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 CSF2P04141 144 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 PRR35P0CG20 571 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 BMP1P13497 986 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TACR1P25103 407 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TGM4P49221 684 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 LBX1P52954 281 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 MAD2L1Q13257 205 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 BCL7AQ4VC05 210 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 CASP12Q6UXS9 341 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 DENND1CQ8IV53 801 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 RGL4Q8IZJ4 473 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 NKAPQ8N5F7 415 aaKnown RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TSPEARQ8WU66 669 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 CLIP3Q96DZ5 547 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 PANX1Q96RD7 426 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 FBXO8Q9NRD0 319 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TOR4AQ9NXH8 423 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 ATP6V1HQ9UI12 483 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF221Q9UK13 617 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 SATB2Q9UPW6 733 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 MRPS7Q9Y2R9 242 aaKnown RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 DYRK1BQ9Y463 629 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 LOC730098B7Z3J9 87 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 GABARAPL2P60520 117 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 SMAD3P84022 425 aaKnown RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 PLEKHG6Q3KR16 790 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 INO80DQ53TQ3 878 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 BRMS1LQ5PSV4 323 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TRIQKQ629K1 86 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 OR4F3Q6IEY1 312 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 OR2T5Q6IEZ7 315 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 FAM151BQ6UXP7 276 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 NRARPQ7Z6K4 114 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 LRRC49Q8IUZ0 686 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms