RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 HLA-EP13747 358 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 MATN1P21941 496 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 CRHBPP24387 322 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 DGKGP49619 791 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 HPCAP84074 193 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 DHCR24Q15392 516 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 LDLRAP1Q5SW96 308 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 CHDHQ8NE62 594 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 PJA1Q8NG27 643 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 GULP1Q9UBP9 304 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 TMEFF2Q9UIK5 374 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 INSL6Q9Y581 213 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 IRAK3Q9Y616 596 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 LOC100130705A0A1B0GUX0 176 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 A0A1W2PPW3 197 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 NPIPB8E9PQR5 432 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 NPC1O15118 1278 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 EPN2O95208 641 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 GBAP04062 536 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 PRLHRP49683 370 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 RAE1P78406 368 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 SRSF11Q05519 484 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 CD47Q08722 323 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 KCNC3Q14003 757 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 CEP68Q76N32 757 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 ARL10Q8N8L6 244 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 VN1R2Q8NFZ6 395 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 HUS1BQ8NHY5 278 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 NEIL2Q969S2 332 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 FCRL1Q96LA6 429 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 USE1Q9NZ43 259 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 FBXO10Q9UK96 956 aa17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 MTCL1Q9Y4B5 1905 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-201ENST00000291842 UNC80Q8N2C7 3258 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 hCG_2014768A0A024R1R8 64 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 UGDHO60701 494 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 NUDT7P0C024 238 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 CASP9P55211 416 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 FGD3Q5JSP0 725 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 C6orf141Q5SZD1 244 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 GRHL2Q6ISB3 625 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 ERAP2Q6P179 960 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 ARHGAP22Q7Z5H3 698 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 TMPRSS11BQ86T26 416 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 SERPINA11Q86U17 422 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 DCP2Q8IU60 420 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 HOMEZQ8IX15 550 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 ZZZ3Q8IYH5 903 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 CFAP206Q8IYR0 622 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 OR7G3Q8NG95 312 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 ZFYVE19Q96K21 471 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 IL23AQ9NPF7 189 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 AASSQ9UDR5 926 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 SH2B3Q9UQQ2 575 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 RUVBL1Q9Y265 456 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 TSPAN11A1L157 253 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 SERTM1A2A2V5 107 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 GABRR3A8MPY1 467 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 NTRK1P04629 796 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 ANXA4P09525 319 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 CYP4B1P13584 511 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 DCKP27707 260 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 TRPC1P48995 793 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 VMACQ2NL98 169 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 CATSPEREQ5SY80 951 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 BROXQ5VW32 411 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 CPZQ66K79 652 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 XAF1Q6GPH4 301 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 LAIR2Q6ISS4 152 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 ZBTB46Q86UZ6 589 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 PTOV1Q86YD1 416 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 SYTL1Q8IYJ3 562 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 BPIFB6Q8NFQ5 453 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 ATL1Q8WXF7 558 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 GLMNQ92990 594 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 NXPE3Q969Y0 559 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 RDH12Q96NR8 316 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 MYOCQ99972 504 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 DUSP26Q9BV47 211 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 OR2AG1Q9H205 316 aa17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 SAMD4AQ9UPU9 718 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-201ENST00000291842 CHD9Q3L8U1 2897 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 PTGES3LE9PB15 166 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 H0YIV9 168 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 H3BM21 787 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 SAP18O00422 153 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 KIAA0355O15063 1070 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 CYP17A1P05093 508 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 ABCB1P08183 1280 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 CD247P20963 164 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 RPS13P62277 151 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 MYBPC3Q14896 1274 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 PRSS36Q5K4E3 855 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 TRAPPC5Q8IUR0 188 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 ZNF557Q8N988 423 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 MAL2Q969L2 176 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 C3orf18Q9UK00 162 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 GNG14A0A1W2PPG7 69 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 MYO1DO94832 1006 aa17.72■□□□□ 0.43
SHKBP1-201ENST00000291842 FKBP9O95302 570 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms