RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 RNF44Q7L0R7 432 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 OR4N4Q8N0Y3 316 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 SMPDL3AQ92484 453 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 DPH7Q9BTV6 452 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 XAB2Q9HCS7 855 aaKnown RBP14.62□□□□□ -0.07
VTI1A-203ENST00000472892 SAMD15Q9P1V8 674 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 KLHL42Q9P2K6 505 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 ZC3H7BQ9UGR2 993 aaKnown RBP14.62□□□□□ -0.07
VTI1A-203ENST00000472892 CDC23Q9UJX2 597 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 NXT1Q9UKK6 140 aaKnown RBP14.62□□□□□ -0.07
VTI1A-203ENST00000472892 B3GNT3Q9Y2A9 372 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 FAM169AQ9Y6X4 670 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 USP9XQ93008 2570 aaPredicted RBP14.61□□□□□ -0.07
VTI1A-203ENST00000472892 ZCWPW2A0A1B0GU75 182 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 TCP11X1B4DZS4 312 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 E5RI56 91 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 SOCS6O14544 535 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 NRDCO43847 1150 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 NRP2O60462 931 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 MED26O95402 600 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 CMPK1P30085 196 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 HSD17B2P37059 387 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 MAGEA3P43357 314 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 NAA25Q14CX7 972 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 FHL5Q5TD97 284 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 PRMT9Q6P2P2 845 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 KIRREL2Q6UWL6 708 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 REXO1L1PQ8IX06 675 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 DTWD1Q8N5C7 304 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 ZNF669Q96BR6 464 aaPredicted RBP14.61□□□□□ -0.07
VTI1A-203ENST00000472892 SERPINB12Q96P63 405 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 PKP4Q99569 1192 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 SLC30A3Q99726 388 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 ZFYVE21Q9BQ24 234 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 SLC6A20Q9NP91 592 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 CTSFQ9UBX1 484 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 TSR3Q9UJK0 312 aaKnown RBP14.61□□□□□ -0.07
VTI1A-203ENST00000472892 FBXL4Q9UKA2 621 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 MED16Q9Y2X0 877 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 HS3ST3B1Q9Y662 390 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 ANKRD12Q6UB98 2062 aa14.61□□□□□ -0.07
VTI1A-203ENST00000472892 CTAGE9A4FU28 777 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 USP1O94782 785 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 CATP04040 527 aaKnown RBP14.6□□□□□ -0.07
VTI1A-203ENST00000472892 EMP3P54852 163 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 PRDX1Q06830 199 aaKnown RBP14.6□□□□□ -0.07
VTI1A-203ENST00000472892 CTBP1Q13363 440 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 THOC5Q13769 683 aaKnown RBP14.6□□□□□ -0.07
VTI1A-203ENST00000472892 PRTGQ2VWP7 1150 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 CRB2Q5IJ48 1285 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 PRAMEF13Q5VWM6 474 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 ZNF470Q6ECI4 717 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 ZNF549Q6P9A3 640 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 CCDC137Q6PK04 289 aaKnown RBP14.6□□□□□ -0.07
VTI1A-203ENST00000472892 SUSD1Q6UWL2 747 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 CYHR1Q6ZMK1 362 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 Q6ZS92 163 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 DENND6AQ8IWF6 608 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 LMNTD2Q8IXW0 634 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 AGGF1Q8N302 714 aaeCLIP14.6□□□□□ -0.07
VTI1A-203ENST00000472892 METTL27Q8N6F8 245 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-203ENST00000472892 NAT8LQ8N9F0 302 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 FBXO15Q8NCQ5 510 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-203ENST00000472892 ASB11Q8WXH4 323 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 TM9SF4Q92544 642 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 KCNJ9Q92806 393 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 SNRNP40Q96DI7 357 aaKnown RBP14.6□□□□□ -0.07
VTI1A-203ENST00000472892 C19orf60Q96EN9 201 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 SIGLEC10Q96LC7 697 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 NAP1L3Q99457 506 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-203ENST00000472892 PLCD4Q9BRC7 762 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 ACAT2Q9BWD1 397 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 SOX17Q9H6I2 414 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-203ENST00000472892 ZBTB20Q9HC78 741 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-203ENST00000472892 ZNF304Q9HCX3 659 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 MRPS30Q9NP92 439 aaKnown RBP14.6□□□□□ -0.07
VTI1A-203ENST00000472892 FAM114A2Q9NRY5 505 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 SEMA3GQ9NS98 782 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 MAU2Q9Y6X3 613 aa14.6□□□□□ -0.07
VTI1A-203ENST00000472892 USP9YO00507 2555 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-203ENST00000472892 SHANK1Q9Y566 2161 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 IGKV1-8A0A0C4DH67 115 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 BLACEA4D250 179 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 H0YGG7 62 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 GOLGA8MH3BSY2 632 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 GFYI3L273 518 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 PHF2O75151 1096 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 EIF2S1P05198 315 aaKnown RBP14.59□□□□□ -0.07
VTI1A-203ENST00000472892 RPA3P35244 121 aaPredicted RBP14.59□□□□□ -0.07
VTI1A-203ENST00000472892 PNLIPRP1P54315 467 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 ARF3P61204 181 aaPredicted RBP14.59□□□□□ -0.07
VTI1A-203ENST00000472892 RELAQ04206 551 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 MUM1Q2TAK8 710 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 TTLL9Q3SXZ7 439 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 ZNF425Q6IV72 752 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 SHISA6Q6ZSJ9 500 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 PAQR7Q86WK9 346 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 IQCKQ8N0W5 287 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 ZADH2Q8N4Q0 377 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 GIMAP7Q8NHV1 300 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms