RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 IMPA1P29218 277 aa22■■□□□ 1.11
LSM4-201ENST00000252816 CMPK1P30085 196 aa22■■□□□ 1.11
LSM4-201ENST00000252816 NFATC3Q12968 1075 aa22■■□□□ 1.11
LSM4-201ENST00000252816 FRMPD2BQ6IN97 320 aa22■■□□□ 1.11
LSM4-201ENST00000252816 LRRC8EQ6NSJ5 796 aa22■■□□□ 1.11
LSM4-201ENST00000252816 CAPN12Q6ZSI9 719 aa22■■□□□ 1.11
LSM4-201ENST00000252816 PROKR1Q8TCW9 393 aa22■■□□□ 1.11
LSM4-201ENST00000252816 NDC1Q9BTX1 674 aa22■■□□□ 1.11
LSM4-201ENST00000252816 MRPS30Q9NP92 439 aaKnown RBP22■■□□□ 1.11
LSM4-201ENST00000252816 SAYSD1Q9NPB0 183 aa22■■□□□ 1.11
LSM4-201ENST00000252816 SMYD2Q9NRG4 433 aa22■■□□□ 1.11
LSM4-201ENST00000252816 ENAMQ9NRM1 1142 aa22■■□□□ 1.11
LSM4-201ENST00000252816 CDC23Q9UJX2 597 aa22■■□□□ 1.11
LSM4-201ENST00000252816 SNX7Q9UNH6 387 aa22■■□□□ 1.11
LSM4-201ENST00000252816 PDE10AQ9Y233 779 aa22■■□□□ 1.11
LSM4-201ENST00000252816 LOC105369274A0A096LPK9 316 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 LOC102723532A0A0G2JNH3 316 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 A0A0J9YVX5 310 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 ZNF839A8K0R7 811 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 C9J4A7 227 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 PIAS1O75925 651 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 PDAP1Q13442 181 aaKnown RBP21.99■■□□□ 1.11
LSM4-201ENST00000252816 ICE2Q659A1 982 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 FAM45BPQ6NSW5 357 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 FBXO42Q6P3S6 717 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 RNF44Q7L0R7 432 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 STRA8Q7Z7C7 330 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 OR4N4Q8N0Y3 316 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 FAM45AQ8TCE6 357 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 ADAMTS17Q8TE56 1095 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 PYROXD1Q8WU10 500 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 SEC14L1Q92503 715 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 TXLNGQ9NUQ3 528 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 TUBD1Q9UJT1 453 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 MAN2B2Q9Y2E5 1009 aa21.99■■□□□ 1.11
LSM4-201ENST00000252816 UTP11Q9Y3A2 253 aaKnown RBP21.99■■□□□ 1.11
LSM4-201ENST00000252816 PCM1Q15154 2024 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 EIF3HO15372 352 aaKnown RBP eCLIP21.98■■□□□ 1.11
LSM4-201ENST00000252816 C8GP07360 202 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 ITGAXP20702 1163 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 SSTR1P30872 391 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 PLTPP55058 493 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 VSX2P58304 361 aaPredicted RBP21.98■■□□□ 1.11
LSM4-201ENST00000252816 DCDP81605 110 aaKnown RBP21.98■■□□□ 1.11
LSM4-201ENST00000252816 PRDX1Q06830 199 aaKnown RBP21.98■■□□□ 1.11
LSM4-201ENST00000252816 NKAIN1Q4KMZ8 207 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 TCTE1Q5JU00 501 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 MLIPQ5VWP3 458 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 MBOAT1Q6ZNC8 495 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 ZC3HC1Q86WB0 502 aaKnown RBP21.98■■□□□ 1.11
LSM4-201ENST00000252816 PAQR7Q86WK9 346 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 MYO1HQ8N1T3 1032 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 PLCD4Q9BRC7 762 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 RAB17Q9H0T7 212 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 SLC25A18Q9H1K4 315 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 SYNPO2LQ9H987 977 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 PARVBQ9HBI1 364 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 SLC22A11Q9NSA0 550 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 ABCF3Q9NUQ8 709 aa21.98■■□□□ 1.11
LSM4-201ENST00000252816 STOX2Q9P2F5 926 aaPredicted RBP21.98■■□□□ 1.11
LSM4-201ENST00000252816 FITM1A5D6W6 292 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 B8ZZF3 427 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 SRPX2O60687 465 aaPredicted RBP21.97■■□□□ 1.11
LSM4-201ENST00000252816 CNOT3O75175 753 aaKnown RBP21.97■■□□□ 1.11
LSM4-201ENST00000252816 KLF7O75840 302 aaPredicted RBP21.97■■□□□ 1.11
LSM4-201ENST00000252816 URI1O94763 535 aaPredicted RBP21.97■■□□□ 1.11
LSM4-201ENST00000252816 ALAS2P22557 587 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 IL2P60568 153 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 CKAP4Q07065 602 aaKnown RBP21.97■■□□□ 1.11
LSM4-201ENST00000252816 SP140Q13342 867 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 GRM7Q14831 915 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 SLC9A5Q14940 896 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 PHKG1Q16816 387 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 WASHC2DQ5SRD0 308 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 ZNF425Q6IV72 752 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 TMEM207Q6UWW9 146 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 ZDHHC24Q6UX98 284 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 TTLL10Q6ZVT0 673 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 SLC26A11Q86WA9 606 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 TMEM151BQ8IW70 566 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 FBXO25Q8TCJ0 367 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 MCOLN3Q8TDD5 553 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 THAP4Q8WY91 577 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 CCDC138Q96M89 665 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 ZFYVE21Q9BQ24 234 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 MCMBPQ9BTE3 642 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 CUTCQ9NTM9 273 aa21.97■■□□□ 1.11
LSM4-201ENST00000252816 CXorf49A8MYA2 514 aaPredicted RBP21.96■■□□□ 1.11
LSM4-201ENST00000252816 SLC16A5O15375 505 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 MED26O95402 600 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 PMS2P54278 862 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 ARSFP54793 590 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 FOXL2P58012 376 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 SLC7A5Q01650 507 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 NAA25Q14CX7 972 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 PALM2Q8IXS6 379 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 DTWD1Q8N5C7 304 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 ABHD17AQ96GS6 310 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 C17orf62Q9BQA9 187 aa21.96■■□□□ 1.11
LSM4-201ENST00000252816 DHRS4Q9BTZ2 278 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms