RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
TOP3B-212ENST00000456075 SLC52A2Q9HAB3 445 aa13.74□□□□□ -0.21
TOP3B-212ENST00000456075 ATG3Q9NT62 314 aa13.74□□□□□ -0.21
TOP3B-212ENST00000456075 MSH5O43196 834 aa13.73□□□□□ -0.21
TOP3B-212ENST00000456075 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
TOP3B-212ENST00000456075 PHACTR3Q96KR7 559 aa13.73□□□□□ -0.21
TOP3B-212ENST00000456075 AK7Q96M32 723 aa13.73□□□□□ -0.21
TOP3B-212ENST00000456075 LGR6Q9HBX8 967 aa13.73□□□□□ -0.21
TOP3B-212ENST00000456075 SPON1Q9HCB6 807 aa13.73□□□□□ -0.21
TOP3B-212ENST00000456075 AKT1S1Q96B36 256 aa13.72□□□□□ -0.21
TOP3B-212ENST00000456075 PPP1R1BQ9UD71 204 aaPredicted RBP13.72□□□□□ -0.21
TOP3B-212ENST00000456075 PAPPAQ13219 1627 aa13.72□□□□□ -0.21
TOP3B-212ENST00000456075 ANP32CO43423 234 aa13.71□□□□□ -0.21
TOP3B-212ENST00000456075 PTCD1O75127 700 aaKnown RBP13.71□□□□□ -0.21
TOP3B-212ENST00000456075 ZBTB7AO95365 584 aa13.71□□□□□ -0.21
TOP3B-212ENST00000456075 TTC5Q8N0Z6 440 aa13.71□□□□□ -0.21
TOP3B-212ENST00000456075 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.22
TOP3B-212ENST00000456075 C5P01031 1676 aa13.69□□□□□ -0.22
TOP3B-212ENST00000456075 FLAD1Q8NFF5 587 aa13.69□□□□□ -0.22
TOP3B-212ENST00000456075 LRP5O75197 1615 aa13.68□□□□□ -0.22
TOP3B-212ENST00000456075 MRC1P22897 1456 aa13.68□□□□□ -0.22
TOP3B-212ENST00000456075 IL17REQ8NFR9 667 aa13.68□□□□□ -0.22
TOP3B-212ENST00000456075 PDGFDQ9GZP0 370 aaPredicted RBP13.68□□□□□ -0.22
TOP3B-212ENST00000456075 MTFR1LQ9H019 292 aa13.68□□□□□ -0.22
TOP3B-212ENST00000456075 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
TOP3B-212ENST00000456075 PNPLA7Q6ZV29 1317 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 GNPATO15228 680 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 HTATSF1O43719 755 aaKnown RBP13.67□□□□□ -0.22
TOP3B-212ENST00000456075 PHF14O94880 888 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 SLC39A6Q13433 755 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 ITPK1Q13572 414 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 LINC00116Q8NCU8 138 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 SLC16A10Q8TF71 515 aa13.67□□□□□ -0.22
TOP3B-212ENST00000456075 NFE2L2Q16236 605 aa13.66□□□□□ -0.22
TOP3B-212ENST00000456075 MCM10Q7L590 875 aa13.66□□□□□ -0.22
TOP3B-212ENST00000456075 PLEKHF1Q96S99 279 aa13.66□□□□□ -0.22
TOP3B-212ENST00000456075 C4BP0C0L5 1744 aa13.66□□□□□ -0.22
TOP3B-212ENST00000456075 CASZ1Q86V15 1759 aa13.66□□□□□ -0.22
TOP3B-212ENST00000456075 BTBD11A6QL63 1104 aa13.65□□□□□ -0.22
TOP3B-212ENST00000456075 POLD1P28340 1107 aa13.65□□□□□ -0.22
TOP3B-212ENST00000456075 RTCBQ9Y3I0 505 aaKnown RBP13.65□□□□□ -0.22
TOP3B-212ENST00000456075 CEMIPQ8WUJ3 1361 aa13.65□□□□□ -0.22
TOP3B-212ENST00000456075 ADAMTS7Q9UKP4 1686 aa13.65□□□□□ -0.22
TOP3B-212ENST00000456075 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.64□□□□□ -0.23
TOP3B-212ENST00000456075 SSFA2P28290 1259 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 LMOD3Q0VAK6 560 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 DCTN1Q14203 1278 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 ZNF790Q6PG37 636 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 COL23A1Q86Y22 540 aaPredicted RBP13.64□□□□□ -0.23
TOP3B-212ENST00000456075 CCDC146Q8IYE0 955 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 SLC4A9Q96Q91 983 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 TAF1LQ8IZX4 1826 aa13.64□□□□□ -0.23
TOP3B-212ENST00000456075 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
TOP3B-212ENST00000456075 RIPK4P57078 832 aa13.63□□□□□ -0.23
TOP3B-212ENST00000456075 RC3H1Q5TC82 1133 aaKnown RBP13.63□□□□□ -0.23
TOP3B-212ENST00000456075 RUNDC1Q96C34 613 aa13.63□□□□□ -0.23
TOP3B-212ENST00000456075 ADAMTS8Q9UP79 889 aa13.63□□□□□ -0.23
TOP3B-212ENST00000456075 QSER1Q2KHR3 1735 aa13.63□□□□□ -0.23
TOP3B-212ENST00000456075 CNTNAP4Q9C0A0 1308 aa13.63□□□□□ -0.23
TOP3B-212ENST00000456075 ZNF831Q5JPB2 1677 aa13.63□□□□□ -0.23
TOP3B-212ENST00000456075 STARD3NLO95772 234 aa13.62□□□□□ -0.23
TOP3B-212ENST00000456075 CRKLP46109 303 aaKnown RBP13.62□□□□□ -0.23
TOP3B-212ENST00000456075 NEUROD2Q15784 382 aa13.62□□□□□ -0.23
TOP3B-212ENST00000456075 TRAPPC3LQ5T215 181 aa13.62□□□□□ -0.23
TOP3B-212ENST00000456075 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
TOP3B-212ENST00000456075 FMNL2Q96PY5 1086 aa13.62□□□□□ -0.23
TOP3B-212ENST00000456075 MRS2Q9HD23 443 aa13.62□□□□□ -0.23
TOP3B-212ENST00000456075 ADRA2BP18089 450 aa13.61□□□□□ -0.23
TOP3B-212ENST00000456075 TAF7Q15545 349 aaPredicted RBP13.61□□□□□ -0.23
TOP3B-212ENST00000456075 MSL1Q68DK7 614 aa13.61□□□□□ -0.23
TOP3B-212ENST00000456075 DNAJC10Q8IXB1 793 aa13.61□□□□□ -0.23
TOP3B-212ENST00000456075 PNISRQ8TF01 805 aaKnown RBP13.61□□□□□ -0.23
TOP3B-212ENST00000456075 TEX13AQ9BXU3 409 aaPredicted RBP13.61□□□□□ -0.23
TOP3B-212ENST00000456075 TUBGCP6Q96RT7 1819 aa13.61□□□□□ -0.23
TOP3B-212ENST00000456075 RPS6KA4O75676 772 aa13.6□□□□□ -0.23
TOP3B-212ENST00000456075 RFC4P35249 363 aa13.6□□□□□ -0.23
TOP3B-212ENST00000456075 TMPOP42166 694 aaKnown RBP13.6□□□□□ -0.23
TOP3B-212ENST00000456075 PTGER2P43116 358 aa13.6□□□□□ -0.23
TOP3B-212ENST00000456075 NPM2Q86SE8 214 aaKnown RBP13.6□□□□□ -0.23
TOP3B-212ENST00000456075 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
TOP3B-212ENST00000456075 ZNF496Q96IT1 587 aaPredicted RBP13.6□□□□□ -0.23
TOP3B-212ENST00000456075 ARXQ96QS3 562 aa13.6□□□□□ -0.23
TOP3B-212ENST00000456075 CCDC87Q9NVE4 849 aa13.6□□□□□ -0.23
TOP3B-212ENST00000456075 RRP7AQ9Y3A4 280 aaKnown RBP13.6□□□□□ -0.23
TOP3B-212ENST00000456075 KCPQ6ZWJ8 1503 aa13.59□□□□□ -0.23
TOP3B-212ENST00000456075 HEG1Q9ULI3 1381 aa13.59□□□□□ -0.23
TOP3B-212ENST00000456075 SMIM5Q71RC9 77 aa13.59□□□□□ -0.23
TOP3B-212ENST00000456075 THUMPD2Q9BTF0 503 aaKnown RBP13.59□□□□□ -0.23
TOP3B-212ENST00000456075 DCAF8L1A6NGE4 600 aa13.58□□□□□ -0.24
TOP3B-212ENST00000456075 CYP19A1P11511 503 aaPredicted RBP13.58□□□□□ -0.24
TOP3B-212ENST00000456075 AMIGO3Q86WK7 504 aa13.58□□□□□ -0.24
TOP3B-212ENST00000456075 COL5A3P25940 1745 aaPredicted RBP13.58□□□□□ -0.24
TOP3B-212ENST00000456075 SIPA1L3O60292 1781 aaPredicted RBP13.58□□□□□ -0.24
TOP3B-212ENST00000456075 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
TOP3B-212ENST00000456075 TJP1Q07157 1748 aa13.57□□□□□ -0.24
TOP3B-212ENST00000456075 KCNQ3O43525 872 aa13.57□□□□□ -0.24
TOP3B-212ENST00000456075 ARHGEF1Q92888 912 aaKnown RBP13.57□□□□□ -0.24
TOP3B-212ENST00000456075 MIS18AQ9NYP9 233 aa13.57□□□□□ -0.24
TOP3B-212ENST00000456075 UBR2Q8IWV8 1755 aa13.56□□□□□ -0.24
TOP3B-212ENST00000456075 SNRPA1P09661 255 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms