Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Hdac6Q9Z2V5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hdac6Q9Z2V5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac6Q9Z2V5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac6Q9Z2V5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.89■□□□□ 0.77
Hdac6Q9Z2V5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Hdac6Q9Z2V5 Thap2-203ENSMUST00000218989 527 ntBASIC19.89■□□□□ 0.77
Hdac6Q9Z2V5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac6Q9Z2V5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac6Q9Z2V5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac6Q9Z2V5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Hdac6Q9Z2V5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hdac6Q9Z2V5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Gm27321-201ENSMUST00000185021 205 ntBASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hdac6Q9Z2V5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Mir6990-201ENSMUST00000183724 91 ntBASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hdac6Q9Z2V5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Gm20949-201ENSMUST00000206478 952 ntBASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Gm18246-201ENSMUST00000221023 728 ntBASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hdac6Q9Z2V5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Gm43474-201ENSMUST00000196415 774 ntBASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hdac6Q9Z2V5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hdac6Q9Z2V5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms