Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Gm11780-201ENSMUST00000136880 516 ntBASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Gm18622-201ENSMUST00000219361 595 ntBASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clip2Q9Z0H8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clip2Q9Z0H8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Mir5131-201ENSMUST00000175426 93 ntBASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Gm2651-201ENSMUST00000203560 838 ntBASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clip2Q9Z0H8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clip2Q9Z0H8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 Gm6089-201ENSMUST00000197666 938 ntBASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clip2Q9Z0H8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms