Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Gm8000-201ENSMUST00000188378 592 ntBASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcb1Q9Z0H3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcb1Q9Z0H3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smarcb1Q9Z0H3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Gm37153-201ENSMUST00000193637 231 ntBASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcb1Q9Z0H3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms