Protein–RNA interactions for Protein: Q9WUZ7

Sh3bgr, SH3 domain-binding glutamic acid-rich protein, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bgrQ9WUZ7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3bgrQ9WUZ7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3bgrQ9WUZ7 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.31■□□□□ 0.52
Sh3bgrQ9WUZ7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Sh3bgrQ9WUZ7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3bgrQ9WUZ7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.29■□□□□ 0.52
Sh3bgrQ9WUZ7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.28■□□□□ 0.52
Sh3bgrQ9WUZ7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Gm11336-201ENSMUST00000118168 334 ntBASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Mir5122-201ENSMUST00000175004 89 ntBASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Gm8520-201ENSMUST00000186517 868 ntBASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Gm29707-201ENSMUST00000196325 491 ntBASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3bgrQ9WUZ7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
Sh3bgrQ9WUZ7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3bgrQ9WUZ7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3bgrQ9WUZ7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3bgrQ9WUZ7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Sh3bgrQ9WUZ7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3bgrQ9WUZ7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3bgrQ9WUZ7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3bgrQ9WUZ7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.26■□□□□ 0.51
Sh3bgrQ9WUZ7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3bgrQ9WUZ7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3bgrQ9WUZ7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3bgrQ9WUZ7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3bgrQ9WUZ7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3bgrQ9WUZ7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3bgrQ9WUZ7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.26■□□□□ 0.51
Sh3bgrQ9WUZ7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3bgrQ9WUZ7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms