Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nubp1Q9R060 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Gm12439-201ENSMUST00000117162 365 ntBASIC13.96□□□□□ -0.17
Nubp1Q9R060 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nubp1Q9R060 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nubp1Q9R060 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nubp1Q9R060 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nubp1Q9R060 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nubp1Q9R060 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Nubp1Q9R060 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nubp1Q9R060 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.95□□□□□ -0.18
Nubp1Q9R060 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.95□□□□□ -0.18
Nubp1Q9R060 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.95□□□□□ -0.18
Nubp1Q9R060 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Gm25911-201ENSMUST00000157621 56 ntBASIC13.95□□□□□ -0.18
Nubp1Q9R060 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.95□□□□□ -0.18
Nubp1Q9R060 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.95□□□□□ -0.18
Nubp1Q9R060 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC13.95□□□□□ -0.18
Nubp1Q9R060 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nubp1Q9R060 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Gm28923-201ENSMUST00000187755 322 ntBASIC13.94□□□□□ -0.18
Nubp1Q9R060 Gm9172-201ENSMUST00000212092 954 ntBASIC13.94□□□□□ -0.18
Nubp1Q9R060 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC13.94□□□□□ -0.18
Nubp1Q9R060 Chchd1-203ENSMUST00000224633 557 ntBASIC13.94□□□□□ -0.18
Nubp1Q9R060 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms