Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sec61a2Q9JLR1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Gm29518-201ENSMUST00000190858 372 ntBASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sec61a2Q9JLR1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Gm25016-201ENSMUST00000158399 131 ntBASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Gm33142-201ENSMUST00000193913 867 ntBASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sec61a2Q9JLR1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Gm7367-201ENSMUST00000057611 492 ntBASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms