Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.97■□□□□ 0.47
Hmgn5Q9JL35 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hmgn5Q9JL35 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Gm20049-201ENSMUST00000219950 730 ntBASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Gm10602-201ENSMUST00000098239 609 ntBASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn5Q9JL35 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgn5Q9JL35 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgn5Q9JL35 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgn5Q9JL35 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgn5Q9JL35 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Hmgn5Q9JL35 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgn5Q9JL35 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgn5Q9JL35 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgn5Q9JL35 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hmgn5Q9JL35 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn5Q9JL35 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn5Q9JL35 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn5Q9JL35 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms