Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Gm12260-201ENSMUST00000122447 411 ntBASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Gm5253-201ENSMUST00000187104 1025 ntBASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpsf1Q9EPU4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Gm27702-201ENSMUST00000184512 56 ntBASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf1Q9EPU4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Gm27300-201ENSMUST00000184085 97 ntBASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Gm27335-201ENSMUST00000184758 97 ntBASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf1Q9EPU4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 Gm13597-201ENSMUST00000121239 375 ntBASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 Gm44945-201ENSMUST00000206764 1187 ntBASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC21.83■■□□□ 1.09
Cpsf1Q9EPU4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cpsf1Q9EPU4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cpsf1Q9EPU4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Cpsf1Q9EPU4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cpsf1Q9EPU4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Cpsf1Q9EPU4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cpsf1Q9EPU4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cpsf1Q9EPU4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Cpsf1Q9EPU4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Cpsf1Q9EPU4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Cpsf1Q9EPU4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms