Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Gm27867-201ENSMUST00000184778 125 ntBASIC16.92■□□□□ 0.3
Gm3404Q9D506 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.92■□□□□ 0.3
Gm3404Q9D506 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.92■□□□□ 0.3
Gm3404Q9D506 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm3404Q9D506 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.92■□□□□ 0.3
Gm3404Q9D506 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.91■□□□□ 0.3
Gm3404Q9D506 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm3404Q9D506 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.9■□□□□ 0.3
Gm3404Q9D506 Gm15165-201ENSMUST00000118140 502 ntBASIC16.9■□□□□ 0.3
Gm3404Q9D506 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm3404Q9D506 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gm3404Q9D506 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
Gm3404Q9D506 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gm3404Q9D506 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Gm3404Q9D506 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm3404Q9D506 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.89■□□□□ 0.29
Gm3404Q9D506 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.89■□□□□ 0.29
Gm3404Q9D506 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm3404Q9D506 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms