Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ssu72Q9CY97 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ssu72Q9CY97 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ssu72Q9CY97 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ssu72Q9CY97 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.83■□□□□ 0.13
Ssu72Q9CY97 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ssu72Q9CY97 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ssu72Q9CY97 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Gm7213-201ENSMUST00000215977 950 ntBASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Gm10566-201ENSMUST00000086739 996 ntBASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Ssu72Q9CY97 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Gm20760-201ENSMUST00000179197 648 ntBASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ssu72Q9CY97 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms