Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc43Q9CR29 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.73■□□□□ 0.43
Ccdc43Q9CR29 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc43Q9CR29 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc43Q9CR29 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc43Q9CR29 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc43Q9CR29 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Ccdc43Q9CR29 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Gm9013-201ENSMUST00000132939 882 ntBASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc43Q9CR29 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.71■□□□□ 0.42
Ccdc43Q9CR29 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc43Q9CR29 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Mir770-201ENSMUST00000103252 94 ntBASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Gm6623-201ENSMUST00000173570 544 ntBASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc43Q9CR29 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms