Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim11Q99PQ2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim11Q99PQ2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim11Q99PQ2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim11Q99PQ2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim11Q99PQ2 Gm11950-201ENSMUST00000121615 838 ntBASIC18.17■□□□□ 0.5
Trim11Q99PQ2 Gm25016-201ENSMUST00000158399 131 ntBASIC18.17■□□□□ 0.5
Trim11Q99PQ2 Gm6345-202ENSMUST00000180900 204 ntBASIC18.17■□□□□ 0.5
Trim11Q99PQ2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim11Q99PQ2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim11Q99PQ2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim11Q99PQ2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim11Q99PQ2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim11Q99PQ2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 Gm45328-201ENSMUST00000210942 917 ntBASIC18.14■□□□□ 0.49
Trim11Q99PQ2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trim11Q99PQ2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms