Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh23Q99PF4 Gm12138-201ENSMUST00000122180 951 ntBASIC16.13■□□□□ 0.17
Cdh23Q99PF4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Gm29541-201ENSMUST00000191351 678 ntBASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Gm43433-201ENSMUST00000196573 481 ntBASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Gm7774-201ENSMUST00000200064 533 ntBASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh23Q99PF4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Gm15358-201ENSMUST00000119249 520 ntBASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Gm9794-201ENSMUST00000202370 423 ntBASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Gm7730-201ENSMUST00000212486 454 ntBASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cdh23Q99PF4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.11■□□□□ 0.17
Cdh23Q99PF4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh23Q99PF4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Gm13829-201ENSMUST00000119600 138 ntBASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Gm18489-201ENSMUST00000172565 551 ntBASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Mir8102-201ENSMUST00000184148 139 ntBASIC16.1■□□□□ 0.17
Cdh23Q99PF4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cdh23Q99PF4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms