Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cstf1Q99LC2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cstf1Q99LC2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cstf1Q99LC2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cstf1Q99LC2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cstf1Q99LC2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cstf1Q99LC2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cstf1Q99LC2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Gm27646-201ENSMUST00000183989 110 ntBASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cstf1Q99LC2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Gm5682-201ENSMUST00000173402 505 ntBASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Gm18622-201ENSMUST00000219361 595 ntBASIC15.85■□□□□ 0.13
Cstf1Q99LC2 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cstf1Q99LC2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms