Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp11Q99K46 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp11Q99K46 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp11Q99K46 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp11Q99K46 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp11Q99K46 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp11Q99K46 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp11Q99K46 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Usp11Q99K46 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp11Q99K46 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp11Q99K46 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp11Q99K46 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp11Q99K46 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.83■□□□□ 0.28
Usp11Q99K46 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp11Q99K46 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.83■□□□□ 0.28
Usp11Q99K46 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp11Q99K46 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp11Q99K46 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.83■□□□□ 0.28
Usp11Q99K46 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp11Q99K46 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.83■□□□□ 0.28
Usp11Q99K46 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp11Q99K46 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp11Q99K46 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp11Q99K46 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Usp11Q99K46 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp11Q99K46 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp11Q99K46 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp11Q99K46 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Usp11Q99K46 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp11Q99K46 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.82■□□□□ 0.28
Usp11Q99K46 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Usp11Q99K46 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.82■□□□□ 0.28
Usp11Q99K46 Gm18421-201ENSMUST00000204122 625 ntBASIC16.82■□□□□ 0.28
Usp11Q99K46 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.82■□□□□ 0.28
Usp11Q99K46 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Usp11Q99K46 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp11Q99K46 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.81■□□□□ 0.28
Usp11Q99K46 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp11Q99K46 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp11Q99K46 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.81■□□□□ 0.28
Usp11Q99K46 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp11Q99K46 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp11Q99K46 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp11Q99K46 Gm29707-201ENSMUST00000196325 491 ntBASIC16.81■□□□□ 0.28
Usp11Q99K46 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp11Q99K46 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Usp11Q99K46 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Usp11Q99K46 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp11Q99K46 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp11Q99K46 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.81■□□□□ 0.28
Usp11Q99K46 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp11Q99K46 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp11Q99K46 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp11Q99K46 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp11Q99K46 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp11Q99K46 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp11Q99K46 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp11Q99K46 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp11Q99K46 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.8■□□□□ 0.28
Usp11Q99K46 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.8■□□□□ 0.28
Usp11Q99K46 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp11Q99K46 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp11Q99K46 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.8■□□□□ 0.28
Usp11Q99K46 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Usp11Q99K46 Mir770-201ENSMUST00000103252 94 ntBASIC16.8■□□□□ 0.28
Usp11Q99K46 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Usp11Q99K46 Gm29518-201ENSMUST00000190858 372 ntBASIC16.8■□□□□ 0.28
Usp11Q99K46 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.8■□□□□ 0.28
Usp11Q99K46 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp11Q99K46 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp11Q99K46 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp11Q99K46 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp11Q99K46 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp11Q99K46 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Usp11Q99K46 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp11Q99K46 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp11Q99K46 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp11Q99K46 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Usp11Q99K46 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp11Q99K46 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp11Q99K46 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms