Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha3Q91Y16 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Pcdha3Q91Y16 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdha3Q91Y16 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha3Q91Y16 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha3Q91Y16 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha3Q91Y16 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha3Q91Y16 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Gm15372-201ENSMUST00000120729 834 ntBASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdha3Q91Y16 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdha3Q91Y16 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdha3Q91Y16 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Pcdha3Q91Y16 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdha3Q91Y16 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdha3Q91Y16 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdha3Q91Y16 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Gm12895-201ENSMUST00000122214 226 ntBASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha3Q91Y16 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms