Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdha9Q91Y11 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha9Q91Y11 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm12497-201ENSMUST00000138778 237 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm8825-201ENSMUST00000182565 998 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm4518-201ENSMUST00000182638 718 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha9Q91Y11 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha9Q91Y11 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Gm7506-201ENSMUST00000207758 815 ntBASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Birc2-201ENSMUST00000054878 378 ntBASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms