Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb1Q91Y08 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Rprl3-201ENSMUST00000157400 290 ntBASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Mir3081-201ENSMUST00000175305 84 ntBASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Gm27704-201ENSMUST00000185094 107 ntBASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb1Q91Y08 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Gm6257-201ENSMUST00000163864 910 ntBASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Gm33142-201ENSMUST00000193913 867 ntBASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Prob1-201ENSMUST00000097619 3021 ntBASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb1Q91Y08 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb1Q91Y08 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms